ggKbase home page

SCNpilot_cont_300_bf_scaffold_1805_9

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 11 / 38 MC: 1
Location: comp(5344..6054)

Top 3 Functional Annotations

Value Algorithm Source
Transposase n=1 Tax=Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) RepID=C7NKH4_KYTSD similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 238.0
  • Bit_score: 336
  • Evalue 3.00e-89
Integrase core domain protein {ECO:0000313|EMBL:KJL36675.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 236.0
  • Bit_score: 455
  • Evalue 3.70e-125
transposase similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 238.0
  • Bit_score: 336
  • Evalue 5.00e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 711
GTGCATGCCGACGATCCCGCGTTCGGGTACCGGTTCATCGCCGACGAGCTCGCTGAGGCGGGGTTCACTGCATCGGAGAGGCGGGTGTGGCGGGTGTGTTCGGAGAACGAGATCTTCAGCGCGTTCGTCCGCAAGCGGCGCGGCAAGGGGCGCCTCGTCGGACCTCCCGTTCGCGACGATCTCGTCCGGCGCGAGTTCACCGCGGCCGGCCCTAACCGGCTCTGGCTCACTGACATCTCTGAGCATCCGACCGGCGAGGGCAAGGTCTATCTGTGCGCGGTGAAGGACGTTTGGTCGAACCGGATCGTCGGGTACTCGATCAACGAGCGGATGACCTCCGAGCTGGCCGTCTCCGCTTTGCGGATGGCGATCCAACGGCGCAACCCGACCGGCACGACCGTTCACAGCGACAGGGGAAGCCAGTTTCGTTCACGGCGCTTCCAGGCCGAACTCGACAGGACCGGGCTCGTCGGATCGATGGGTCGCGTCGGCGCTGCCGGTGACAACGCGGCCATGGAATCGTTCTTCGCACTGCTCCAGAAGAACGTGCTCAACAGCCGCCGCTGGGCGACCCGCGACGACCTCCGCCTCGCGATCGTGACCTGGATCGAACGGACCTACCACCGCCGTCGCCGGCAGCGCGTCCTGGGCAAGTTGACGCCCATCGAGTTCGAAGCCATCATGACCACACCGGCCGCGTCCGCGGCCTAG
PROTEIN sequence
Length: 237
VHADDPAFGYRFIADELAEAGFTASERRVWRVCSENEIFSAFVRKRRGKGRLVGPPVRDDLVRREFTAAGPNRLWLTDISEHPTGEGKVYLCAVKDVWSNRIVGYSINERMTSELAVSALRMAIQRRNPTGTTVHSDRGSQFRSRRFQAELDRTGLVGSMGRVGAAGDNAAMESFFALLQKNVLNSRRWATRDDLRLAIVTWIERTYHRRRRQRVLGKLTPIEFEAIMTTPAASAA*