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SCNpilot_cont_300_bf_scaffold_5540_2

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 11 / 38 MC: 1
Location: comp(1916..2407)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 163.0
  • Bit_score: 277
  • Evalue 9.40e-72
Peptide deformylase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N865_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 163.0
  • Bit_score: 277
  • Evalue 6.80e-72
N-formylmethionyl-tRNA deformylase similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 163.0
  • Bit_score: 277
  • Evalue 1.90e-72

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGGCCGTACGCCCGATCCGCCTCTTCGGCGACCCCGTCCTGCGCGCCCCGGCCGCGCCCGTCGAGCACATCGACGACGGGGTGCGGGCGCTGATCCGCGATCTCGTGGACTCGGTGGAGCCTCCCGGTCGTGCGGGCGTGGCGGCTCCCCAGATCGGCGTGGGAGTGCGCGCGTTCAGCTACAACATCGACGGCCGGATCGGCTACGTCATCAATCCGCGCCTCGTCGAGGTGTCGGGCGAGCCCGAGCGGATCGGCGAGGGATGCCTGTCCGTTCCCGGGCTCTGGCATGAGGTCTCTCGCTACCCCCGGGCAAGGGTCGTCGGGATCGATCTGGACGGCGACGAGGTGATCCTCGAAGGCGAGGGGCTGCTCGCGCAGGCGCTCCAGCACGAGACCGATCACCTCGACGGGATGCTCTACCTCGATCGCCTCGAGCAGGCGGACCGCCGCCTGGCCATGAAGCAGATCCGCGAGTCGGACTGGTTCTGA
PROTEIN sequence
Length: 164
MAVRPIRLFGDPVLRAPAAPVEHIDDGVRALIRDLVDSVEPPGRAGVAAPQIGVGVRAFSYNIDGRIGYVINPRLVEVSGEPERIGEGCLSVPGLWHEVSRYPRARVVGIDLDGDEVILEGEGLLAQALQHETDHLDGMLYLDRLEQADRRLAMKQIRESDWF*