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SCNpilot_cont_300_bf_scaffold_6546_8

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 11 / 38 MC: 1
Location: 4528..5517

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 329.0
  • Bit_score: 620
  • Evalue 1.20e-174
DNA-directed RNA polymerase subunit alpha n=1 Tax=Microbacterium sp. B19 RepID=UPI000345F016 similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 329.0
  • Bit_score: 623
  • Evalue 1.00e-175
rpoA; DNA-directed RNA polymerase, alpha subunit/40 kD subunit similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 329.0
  • Bit_score: 614
  • Evalue 1.70e-173

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Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 990
GTGCTCATCGCACAGCGTCCCACCCTGACCGAGGAGAAGATCGGGGAGTTCCGCAGCCGCTTCATCATCGAGCCCCTGGAGCCCGGCTTCGGCTACACCATCGGCAATGCGCTGCGTCGCAGCCTTCTGTCCTCGATCCCGGGGGCGGCGGTCACCAGCATCCGCATCGACGGCGTCCTCCACGAGTTCAGCACCATTCCGGGTGTCAAGGAGGATGTCACCGAGATCATCCTCAACATCAAGCAGCTGGTCGTCTCCAGCGAGCGCGACGAGCCGATCACGGCGTACCTGCGCAAGACCGGCGCCGGTGAGGTCACCGCCGCCGACATCTCCGCTCCGGCCGGCGTCGAGGTGCACAACCCCGAACTGGTCATCGCGACCCTGAACGACACCGCGCGCTTCGAGCTCGAGCTCACGATCGAGCGCGGCCGCGGCTACGTGTCGGCCACGCAGAACCGCAACGAGTACGCCGAGGCGGGGCAGATCCCGATCGACTCGATCTACTCGCCGGTGCTCAAGGTCAGCTACCGCGTCGACGCGACGCGTGCGGGCGAGCGCACCGACTTCGACAAGCTCGTGCTCGACGTGGAGTCGAAGTCCTCCATCGCCCCGCGCGACGCCGTGGCGTCCGCCGGTCGCACGCTGACCGAGCTGTTCGGCCTCGCCCGCGAGCTGAACGTCGACGCCGAGGGCATCGAGATCGGCCCCGCGCCGGTCGAGACGGTCCTGTCGAACGAGCTGTCGATGCCCATCGAGGACCTCGACCTGTCGGTGCGGTCGTACAACTGCCTGAAGCGTGAGGGCATCAACACGGTCTCCGAGCTCGTCGCTCTGTCCGAGACCCAGCTGATGAACATCCGCAACTTCGGCCAGAAGTCGGTCGACGAGGTGCGCGACAAGCTGACGTCGCTCGGCCTGTCGCTGAAGGACTCGGTCCCCGGGTTCGACGGCGCGCACTTCTACGGCGGCTACGACGACGAGACCGCCTGA
PROTEIN sequence
Length: 330
VLIAQRPTLTEEKIGEFRSRFIIEPLEPGFGYTIGNALRRSLLSSIPGAAVTSIRIDGVLHEFSTIPGVKEDVTEIILNIKQLVVSSERDEPITAYLRKTGAGEVTAADISAPAGVEVHNPELVIATLNDTARFELELTIERGRGYVSATQNRNEYAEAGQIPIDSIYSPVLKVSYRVDATRAGERTDFDKLVLDVESKSSIAPRDAVASAGRTLTELFGLARELNVDAEGIEIGPAPVETVLSNELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVRDKLTSLGLSLKDSVPGFDGAHFYGGYDDETA*