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SCNpilot_cont_300_bf_scaffold_12642_4

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 11 / 38 MC: 1
Location: comp(4321..4983)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1M1_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 220.0
  • Bit_score: 380
  • Evalue 1.30e-102
RNA polymerase subunit sigma-54 {ECO:0000313|EMBL:KHK98901.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 220.0
  • Bit_score: 380
  • Evalue 1.40e-102
ribosome-associated protein Y (PSrp-1) similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 214.0
  • Bit_score: 342
  • Evalue 8.50e-92

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGGAAACCAGCATCGTCGGTGTCGGAGTGAGCGTTTCGGATCGATTCCGCACGGTGGTCGATGAGAAGGCCGTCCGCATCGAGACCCTCGCTCCGAGAGCGCAGCGCCTGGATGTCAAGGTCACCCACCGCGCCTACCACAACGGCCGGATGGAGGACTCCACCGTCGAGCTCACCCTGACCGGCAAGGGCCCCCTCGTGCGGGCCGAGGCCGTGGACGGCGACAAGTTCACCGCGCTGGACATCGCCGTCGACAAGCTCGCCGAGCAGGTGCGGCGCGCGAAGGACAAGCGCATCGATGCGCGCAAGCATCCGCGGGGTGCGAAGCTCGACAAGGGCACGGGGGCGCTCGAGGGCGTCGACGTGCAGCCCGCGTCCGTCGACGTGCTGCGTGCCGTCGCGACGGGGGAGATCCCGATCATCACCGGTGCCGAGGACGAGGAGGACTACACGCCGGTCGTCATCCGCACGAAGCGCTTCGGCGCGGAGTGGATGACCGTCGAGGACGCCGTGGACCGCATGGAGCTCGTCGGTCACGACTTCTTCCTCTTCATCGATGCGCGCACCGATCATCCCAGCGTGGTGTACCGGCGCAAGGGCTGGGACTACGGGGTCATCTCGCTGACGGCGGCCACTCCGCCGGCGACCGAGCTCGCGTCATGA
PROTEIN sequence
Length: 221
METSIVGVGVSVSDRFRTVVDEKAVRIETLAPRAQRLDVKVTHRAYHNGRMEDSTVELTLTGKGPLVRAEAVDGDKFTALDIAVDKLAEQVRRAKDKRIDARKHPRGAKLDKGTGALEGVDVQPASVDVLRAVATGEIPIITGAEDEEDYTPVVIRTKRFGAEWMTVEDAVDRMELVGHDFFLFIDARTDHPSVVYRRKGWDYGVISLTAATPPATELAS*