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SCNpilot_cont_300_bf_scaffold_30588_6

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 11 / 38 MC: 1
Location: comp(3770..4090)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase LigD n=1 Tax=Leifsonia sp. 109 RepID=UPI00035CA242 similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 101.0
  • Bit_score: 164
  • Evalue 5.40e-38
Putative DNA ligase-like protein {ECO:0000313|EMBL:KJL23249.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae. similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 101.0
  • Bit_score: 173
  • Evalue 2.10e-40
eukaryotic-type DNA primase similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 104.0
  • Bit_score: 164
  • Evalue 2.00e-38

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 321
GAGCTCGGGCCGGCGGAGAAGCCGCCGCGCGGGTCCAGCGGCGACGGCCGCCGCGTGTCGACCATGCCGCTCATCGAGGTCGCCCGGACCAAGACGAAGCCCGAGGCCGAGCAGGCACTCGCGCAGTGGCGCGGCGCCCACCCCGCGGCATCCGCCCTGCTGCATCCCGCCGATGCGCTGATCGACGGGATGCGCGGGTCGAGCTCGCTCTGGTACCGGGTGCGCATCAACCTGCAGCACGTCCCCGAGGCGGAGCGCCCGGAGCAGGAGCCGCTCCTCGACGACTACGACCCGCCCTGGGGCCCCTCCACGCATCGCTGA
PROTEIN sequence
Length: 107
ELGPAEKPPRGSSGDGRRVSTMPLIEVARTKTKPEAEQALAQWRGAHPAASALLHPADALIDGMRGSSSLWYRVRINLQHVPEAERPEQEPLLDDYDPPWGPSTHR*