ggKbase home page

SCNpilot_cont_300_bf_scaffold_196_10

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(12698..13819)

Top 3 Functional Annotations

Value Algorithm Source
small mechanosensitive ion channel protein MscS n=1 Tax=Spirosoma panaciterrae RepID=UPI000372800B similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 369.0
  • Bit_score: 717
  • Evalue 7.60e-204
  • rbh
mechanosensitive ion channel protein MscS similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 369.0
  • Bit_score: 621
  • Evalue 2.10e-175
  • rbh
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ADB41896.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 370.0
  • Bit_score: 621
  • Evalue 1.00e-174

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1122
ATGCAACAGCAACTTGACCTATGGATACGGGCGATTGTCCGTTGGTTTGGCTATGTACCGAATCGCGATTTGTCGGGATGGATATTGCTCATCATCGCCGTTGTACTAGGACTAGCCGTCGATGTGGTCATTACACAGACCATCCGGTTTGTGGTGCGCCGACGGTCGTTTCGAACGCTATCTCTTTTAAAAGTGTACGCTCGCTGGGCGTTCTGGTTGTTTGTACCCTCGCTATTTTTTCTGCTGGCTACAAATTTGCAGTCAGAGCGTTTTTTGCGTCGGCACCCTGTAGCCGACAAAACCGCTGAAATCCTTTTTCTGATTACAACAACCTGGTTTATCGTCCAACTGCTCAAGGTGGGCGAAAAACGGCTTATTTATGAATACGACACCACGAATGATACCAATCTGGCTCATCGGAAATTCGTTACGCAGGTACGTTTTTTCCGTCGGCTCATTGTTATTCTGGTCGTTATACTTGGGGCTTCGCTTTTACTCATTACCTTTCAGGGGAGCCGAAAAGTAGGCCTTAGTGTGCTGACATCGGCCGGGGTAGTGTCTGTCGTACTTGGGTTTGCCGCCCAGAAGACATTAGCGAACCTGCTGGCAGGTATCCAGATAGCGCTCAATCAGCAGATTCGCCTGGACGATGCGGTTGTGGTTGAAAAAGAGTGGGGTCGTATCGAAGAAATAAACCTGACCAGTGTAATTGTGCGGCTTTGGGACCGTCGACGATTGATTCTGCCTATTACCTACTTTGTCGAAACGCCTTTCGAGAACTGGACCCGCTCAGATGCATCCATCGTTGGGGCCATTTTTCTCTATCTGGATTATACGGTTCCTGTTGAAGCTGTTCGAAAAAAAGCGCGTGAACTGGCTGAAAATGACCCGCTCTGGACTGGCGATAGCTTTGCGGTACAAGTGACGGATACCACTCCTACCTGCATTCAGGTAAGGGTGCTGGTATCGGCCCAGGATGCCCCTTCAGCCTTTGATCTGCGCTGTCATATGCGAGAAAATCTGATAGCGTTTATCCGCGATGAGTACCCGCAAAGTCTGCCTCAAACGCGACTTATGCTGGCCGAAGAACTGAAGCCCCAGGAGCACTCGACTGGCCAATAA
PROTEIN sequence
Length: 374
MQQQLDLWIRAIVRWFGYVPNRDLSGWILLIIAVVLGLAVDVVITQTIRFVVRRRSFRTLSLLKVYARWAFWLFVPSLFFLLATNLQSERFLRRHPVADKTAEILFLITTTWFIVQLLKVGEKRLIYEYDTTNDTNLAHRKFVTQVRFFRRLIVILVVILGASLLLITFQGSRKVGLSVLTSAGVVSVVLGFAAQKTLANLLAGIQIALNQQIRLDDAVVVEKEWGRIEEINLTSVIVRLWDRRRLILPITYFVETPFENWTRSDASIVGAIFLYLDYTVPVEAVRKKARELAENDPLWTGDSFAVQVTDTTPTCIQVRVLVSAQDAPSAFDLRCHMRENLIAFIRDEYPQSLPQTRLMLAEELKPQEHSTGQ*