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SCNpilot_cont_300_bf_scaffold_551_18

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 23271..23702

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Dyadobacter beijingensis RepID=UPI0003620A11 similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 139.0
  • Bit_score: 121
  • Evalue 9.30e-25
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 137.0
  • Bit_score: 124
  • Evalue 1.50e-25
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 137.0
  • Bit_score: 119
  • Evalue 7.60e-25

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Taxonomy

R_Fluviicola_43_260 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 432
GTGGTCCAGGAGATATTTGTCCGGCTCTACGACCAACGAGACAGGATACCCCTGCACACCTCCCTGAAAGCCTATTTGTATAAGGCCGTCCAAAACACCTGCCTTACTCATCTCAAGCAGGCCCAGGTGTATCAACTCCATCAGCAGCATCTACGGCAACTTACCCCACAGACTGACCCTACCGAGCCGATCCTGCAACTGGAACTCGAGCACCTGATTTGGCAGGCCGTGCAACGCTTGCCCCAGCAATGCGGACGAATCTTTCAGATGAATCGCTTTGAGGGCAAGAAAAATAACCAGATTGCCCAGGAGTTAGGCTTGTCCATTCGGACCGTTGAAACCCAGATCAGCAAAGCCCTGGCTCTACTACGGGAAGCCCTGTCGGACTACCTGCCCGTACTTCTATTGCTGACCCCCGTTGATTTTTTATAA
PROTEIN sequence
Length: 144
VVQEIFVRLYDQRDRIPLHTSLKAYLYKAVQNTCLTHLKQAQVYQLHQQHLRQLTPQTDPTEPILQLELEHLIWQAVQRLPQQCGRIFQMNRFEGKKNNQIAQELGLSIRTVETQISKALALLREALSDYLPVLLLLTPVDFL*