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SCNpilot_cont_300_bf_scaffold_419_11

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 21016..21771

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Spirosoma panaciterrae RepID=UPI000370EF3E similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 251.0
  • Bit_score: 440
  • Evalue 1.60e-120
  • rbh
LytTR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 254.0
  • Bit_score: 379
  • Evalue 5.50e-103
  • rbh
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADB39186.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spiros similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 254.0
  • Bit_score: 379
  • Evalue 2.70e-102

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 756
ATGCGCTGCCTTATTGTTGACGATGAACCGCTCGCTCACGCTGTTTTGAGCGACTATATTCGAAAAGTACCTTTCCTGGAACTGGTTGGCGCAACAACCAGCCCAATCGATGCCTTAACGTACGTGCAACGGGGTGAAGTAGACCTGGTTTTTCTGGATATTCAAATGCCTGAACTCACAGGAATGCAGTTTCTGAAATTAGTTGAACGAGCCGTTGATAACCATACATGTCGGGTTATTCTGACCACGGCCTACTCAAGCTATGCATTGGAAGGTTACGAACACAATGTGGTTGACTATCTGCTCAAACCCGTTTCATTCGAGCGCTTCTACAAAGCTGTCCAGAAACTGTATTCGCCAGCCCAGTCAGCCGTTTCGGTCAGCAGTTCGATTAGTGAGAACGGCCAACATACCCAAACAGAATCGGCCCCAAAAGATTTCATTTTCATCAAGACGGAATATCGTTTGCAACGCATTAGCCTGAGTGACATTCTGTATTGCGAAGGGCTAAAGGATTATGTCTCGATTTATACGGTAACCGAACGTATTCTGGCGCTTCAAACGATGAAAAGTCTGGAAGAAAAGCTACCATCCATTCAGTTCGTCCGCGTTCATAAATCCTATATTGTGGCTCTCAATCGAATTGAATCCATCGAACGAAACCGTATATACATTAATCAGCCAGGTCATGCCCAGGCTGTTGTCCCTATTGGCGAAACGTATCGGGATGCTTTCTATCGACTCATTGAAGAGTAG
PROTEIN sequence
Length: 252
MRCLIVDDEPLAHAVLSDYIRKVPFLELVGATTSPIDALTYVQRGEVDLVFLDIQMPELTGMQFLKLVERAVDNHTCRVILTTAYSSYALEGYEHNVVDYLLKPVSFERFYKAVQKLYSPAQSAVSVSSSISENGQHTQTESAPKDFIFIKTEYRLQRISLSDILYCEGLKDYVSIYTVTERILALQTMKSLEEKLPSIQFVRVHKSYIVALNRIESIERNRIYINQPGHAQAVVPIGETYRDAFYRLIEE*