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SCNpilot_cont_300_bf_scaffold_49893_2

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(719..1075)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S620_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 118.0
  • Bit_score: 228
  • Evalue 2.60e-57
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 118.0
  • Bit_score: 230
  • Evalue 3.30e-58
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADY52123.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 118.0
  • Bit_score: 230
  • Evalue 1.60e-57

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Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 357
GTGAGTGGCTTTGTTGGTGGGGACTTCCAGAACGGAAGTACAAATGATGGGAGGCTTTTATTGCAATTTACAGTTGGTTCAATGCAACTTTTAAATTACATTTGTACATTCATAATAAAGTCAATTTTAATCCTTTTTGAGATGAAAATATCAGGCAGACATATTGGAGAAATGCTGAAAGAAGCCAGAGAACAAAGACAGCTAACTCAAGAACAATTAGCCCAAAAAGTGGGTAAGAAAAGGAGTTACATTTCTAAGGTCGAAACTGATTATGGCAATAATATCAAACTTCAAACCCTTAAAGAGATAGTAGAAAAGGGATTTGACGGTACGGTTAAAATTAATTTGGAACTCTGA
PROTEIN sequence
Length: 119
VSGFVGGDFQNGSTNDGRLLLQFTVGSMQLLNYICTFIIKSILILFEMKISGRHIGEMLKEAREQRQLTQEQLAQKVGKKRSYISKVETDYGNNIKLQTLKEIVEKGFDGTVKINLEL*