ggKbase home page

SCNpilot_cont_300_bf_scaffold_1105_5

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

near complete RP 52 / 55 MC: 7 BSCG 51 / 51 MC: 6 ASCG 13 / 38 MC: 1
Location: comp(4005..4784)

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein HMPREF0204_11662 n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYR4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 258.0
  • Bit_score: 357
  • Evalue 1.10e-95
  • rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 259.0
  • Bit_score: 450
  • Evalue 2.20e-123
Ku domain protein similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 259.0
  • Bit_score: 354
  • Evalue 1.90e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Epilithonimonas sp. FH1 → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 780
ATGAGAGCAATTTGGAATGGTGCAATTGGTTTTGGGTTGGTTAATATTCCCATCAAATTGTATTCGGCGACAGATTCGAGCACTTTAGATCTGGATATGCTGGACAGTAAAGATCTTAGCAATATCAGATTCAAACGTGTTAACGAAAGTACCGGGAAAGAAGTGGTTTGGGAAGATATTGTGAAAGGTTATAAAATAGAGGATAAATATATCGTTCTGGATGATAAGGATTTTGAAGCGGCAAGCCCGGAAAAATCTAAGGTTCTCAGTCTTTCTCAGTTTGTCAAGGAAGCGGAGATCGATCCTGCTTTGTTCGAGACGCCTTATTTTCTGGAGCCACAGAAAAATGGTGAAGCTGCTTATAAATTATTATTAAAAGCTTTAACCAAAACCAAAATGGCGGGAATCGGTTCATTTGTCCTGAGAGAACGCGAAATTCTTTGCCTGATCCGGCCATATGAAGATAAAATTTTAATGGTTAACAGGATGCGTTACCCCGAAGAGATGCGCGACTTTGAAGACTTAAAAATTCCGTCCGGAAGCGCACCCAAACCTGCCGAGCTGAAAATGGCGGAACATCTCATAAAATCCCTTGCAACGGAATTTGACCCATCAAAATATAAAGACACTTATAATGCAGACCTTTTAAAAATCATTAAACAAAAAGCAAAAGGCAAAAAAATCAAATTGACCGAAATTAAAGAACCCGAAGGCAAAGCAACCGATCTGATGGCAATGCTGAAAGCTAGCCTGGAAAAAGGAAAGAAAAAAGTGGGGTGA
PROTEIN sequence
Length: 260
MRAIWNGAIGFGLVNIPIKLYSATDSSTLDLDMLDSKDLSNIRFKRVNESTGKEVVWEDIVKGYKIEDKYIVLDDKDFEAASPEKSKVLSLSQFVKEAEIDPALFETPYFLEPQKNGEAAYKLLLKALTKTKMAGIGSFVLREREILCLIRPYEDKILMVNRMRYPEEMRDFEDLKIPSGSAPKPAELKMAEHLIKSLATEFDPSKYKDTYNADLLKIIKQKAKGKKIKLTEIKEPEGKATDLMAMLKASLEKGKKKVG*