ggKbase home page

SCNpilot_cont_300_bf_scaffold_2093_13

Organism: SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Location: comp(12444..13223)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding regulatory protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FYZ1_STIAD similarity UNIREF
DB: UNIREF100
  • Identity: 36.3
  • Coverage: 267.0
  • Bit_score: 158
  • Evalue 1.20e-35
RNA polymerase sigma 70 {ECO:0000313|EMBL:KFA94149.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy similarity UNIPROT
DB: UniProtKB
  • Identity: 38.5
  • Coverage: 260.0
  • Bit_score: 163
  • Evalue 4.10e-37
DNA-binding regulatory protein similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 267.0
  • Bit_score: 158
  • Evalue 3.50e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cystobacter violaceus → Cystobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
GTGAACGAGGGGCGGATCGACGTGATCTTCGAGGCTGGGAAGCGCGCCTGGCCCGCGCTCCTGGTACCTCGCGCCTCCTTCGTCGCGGCAGTGAAACGGCATGCGGAGAAGGCGGCATCGACGGAACCCGTGGTCGAGTCGGCGAACGCGGCGGACTTCTATCTCGCCGTCGCCTGCGTCGAGGGCGTGAAGGGAGCGGCGTCGGCGTTTCGGAAGCACGTGCTCGTCCACGTCCCGGCGTACGTCGGGACGCGTGCGCCCGCCGAAGACGTCGAGCAGCTCGTCGCCATGCGCCTCCTCCTTCCGGATGGCGATCGACCACCACAGATCTCCGAGTACAGCGGCAAGGGCTCGCTCGGAGCATGGGTTCGTGTCGTCGCGACGCGGATCGCTCTGAACCTCCGCCGCAAGAAGGAGGTCCCCGAAGAGGTCGCCCTCATCCCGCTCGGAACGGCCCCAGAGGTCGACTTCTCGCGGTTTAGGTACAAGACCGAGTTCAAGGCGGCCTTCGAGCACGCCCTTGGCGAGCTCTCCGCCGACGAACGCCTCCTTCTCCGACTCCATTCGATCGAGCGAATGCGTGGCGAGGACATCGCGCGCCTCTTCGAGGTCGACCGCTCCACCGTCATGCGGAGGCTCGCCCACGCCCGTGAGACGCTCTTCGAGCTCACCCGCGCAGTCATGATGCAGAAGCTGCGGCTTTCGACGGAGGAGTTCGAGAGCTTCGCCCGCGACGTCCAGAGCGGCATCGACCTCACATTGAGCCGCGTGTTCGCATGA
PROTEIN sequence
Length: 260
VNEGRIDVIFEAGKRAWPALLVPRASFVAAVKRHAEKAASTEPVVESANAADFYLAVACVEGVKGAASAFRKHVLVHVPAYVGTRAPAEDVEQLVAMRLLLPDGDRPPQISEYSGKGSLGAWVRVVATRIALNLRRKKEVPEEVALIPLGTAPEVDFSRFRYKTEFKAAFEHALGELSADERLLLRLHSIERMRGEDIARLFEVDRSTVMRRLAHARETLFELTRAVMMQKLRLSTEEFESFARDVQSGIDLTLSRVFA*