ggKbase home page

SCNpilot_cont_300_bf_scaffold_2146_2

Organism: SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Location: comp(1178..2035)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08TA0_STIAD similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 285.0
  • Bit_score: 309
  • Evalue 3.70e-81
  • rbh
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KFE68036.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 280.0
  • Bit_score: 315
  • Evalue 9.30e-83
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 285.0
  • Bit_score: 309
  • Evalue 1.00e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyalangium minutum → Hyalangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
GTGCACGTGCAGCCCGACACCTTCGAGCCGCACCGACGGTATCTCTTCGGGATCGCCTACCGGATGCTGGGCTCGGCGGCCGACGCCGACGACATGGTGCAGGAGACGTTCGTGCGCTGGCAGGCGGCGGAGAAGAGCGACGTCCGATCCGTGCGCGCCTTCCTCGCGACGATCCTGACGCGCATCTGCCTCGACCGACTCAAGGAGGCTCACACCACGCGCGTCGACTACGTCGGTCCCTGGCTGCCCGAGCCGCTCCTGACGGAAGGCGACGGCGACAGCGACGCGGTGGAGGCCGCCGAGTCGATCTCGCTCGCGTTCCTCGTCCTCCTCGAGAGCCTCACGCCGCTCGAGCGCGCGGTGCATCTCCTCCACGACGTGTTCGACTACAGCCACGACGAGGTGGCGAGCATCGTCGGTCGAGACGCCGCGGCCTGCCGCAAGATCCTCGAGCGCGCGCGGAAGGACATCGTCGCGCGACGGCCGCGCTTCGCTCCGAGCAAGGAGGCCCATCGCAGCATGCTCGGTCACTTCGCTGCCGCGGTGACGACGGGGGATGCCACCGCGCTCGAGCAGCTCCTCGTCGACGACGTCCGTGCCTTCTCCGACGGCGGTGGCAAGGCGACCGCCGCGCGGAAGCCGATCGAGGGACGCGCTGCGGTCGCGCGGTTCTACGCCGGGCTCGCGCGGCTCGCTCCGGACGATACGACGGTGGAGATTCTGGAAATGAACGGCTGGCCCGCGCTCGTCGTCCATGTGGGCTCGAAGCCGTTCACGGTCGTCCAGCTCGAGACCGACGGCACGGCGATTCACGCGATCCGCGCGACCCTGAACCCGGACAAGCTCGCGCGGCTCTGA
PROTEIN sequence
Length: 286
VHVQPDTFEPHRRYLFGIAYRMLGSAADADDMVQETFVRWQAAEKSDVRSVRAFLATILTRICLDRLKEAHTTRVDYVGPWLPEPLLTEGDGDSDAVEAAESISLAFLVLLESLTPLERAVHLLHDVFDYSHDEVASIVGRDAAACRKILERARKDIVARRPRFAPSKEAHRSMLGHFAAAVTTGDATALEQLLVDDVRAFSDGGGKATAARKPIEGRAAVARFYAGLARLAPDDTTVEILEMNGWPALVVHVGSKPFTVVQLETDGTAIHAIRATLNPDKLARL*