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SCNpilot_cont_300_bf_scaffold_5019_12

Organism: SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Location: 11019..11432

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D6V0_MYXXD similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 136.0
  • Bit_score: 159
  • Evalue 2.30e-36
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 133.0
  • Bit_score: 159
  • Evalue 6.30e-37
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="M similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 133.0
  • Bit_score: 159
  • Evalue 3.20e-36

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Taxonomy

Myxococcus xanthus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
GTGATCCCGTGGTTCTACCGGACGCTTCGCAACGCGACCATCGACTACTACCGTCGAACGAAGGTGGCGGGTCGGGCGCTCGCGCAGTTCGCCGAGGAGATCGAGACCGCCGAAGAGCCGGTCGAGATGGTGCGGGCGGAGGTCTGCTCGTGCGTGCTCCGCCTGGCCGGTACGCTCAAGCCCGAATACGCGGACGCGCTCCGGCGCGTCGAAGTCGACGGCGTCTCGATGCGGACGTTCGCCGAAGAGCGAGGCATCTCGAAGAGCAACGCGGCGGTTCGCGTCTTCCGGGCGAGGGAGGCGCTCCGCCGTCAGCTCGCCGTGTCATGCGGAACGTGCGCGGAGCACGGGTGTGTCTCGTGCACGTGTGCAATGCGCGACGATGGCGCCGGGCAGTGCGCGCCGGTGGTGTAA
PROTEIN sequence
Length: 138
VIPWFYRTLRNATIDYYRRTKVAGRALAQFAEEIETAEEPVEMVRAEVCSCVLRLAGTLKPEYADALRRVEVDGVSMRTFAEERGISKSNAAVRVFRAREALRRQLAVSCGTCAEHGCVSCTCAMRDDGAGQCAPVV*