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SCNpilot_cont_300_bf_scaffold_5378_6

Organism: SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Location: comp(4239..4850)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A1995 similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 125.0
  • Bit_score: 148
  • Evalue 1.00e-32
RNA polymerase sigma factor {ECO:0000313|EMBL:KFC68607.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 192.0
  • Bit_score: 121
  • Evalue 1.10e-24
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 189.0
  • Bit_score: 118
  • Evalue 2.40e-24

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
GTGAAGGACGCCTATCTCGAGCTGCTGGCACGAGCACGGCGGGTGACGCGACGTTCGGACGAGGCGGAAGACCTCCTCCCGGCGATCCTGCTCTCTGCCATCCATGCAGGGCGTGCGGATCTCTCGTGCCCGAACAACCGGCGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGCTGGTCCACGGACGCCGCGGCGCCTGCTGGCAGCCCGCTTCCGGCGTCGTTTCTCGGAGCGCTCACGCCGAGCCTGCGCACGACGGCCCTGCTGGTCCTGACCGGGCATGCCAAGCCCGAGATCCTCTGGTTGCAACGGCTCTCGGATGCGGCGTTCCGGCAGCGCGTCAGCGCGATCCGACGGCGCTGGCGCGAATCTGACGATCCCTCGATCGAAGACGCTGCGGGCCTTGCCGGGCCGCTGAGCTACGGGCGGATCCGGCGTGCGCTCCTCGGGGCAGCGCAGGGCGAAGGGGTGGCGCTTGCCAGCCATGATCCCGACGGACATCTTTTTGTCATACGGACGAGCTCACAAAACGACGGCCGACGGCAACACGGGGGTGAGGAGGAACCTGCGAAGGCCTCCACTACAGTCAGGGAGTAA
PROTEIN sequence
Length: 204
VKDAYLELLARARRVTRRSDEAEDLLPAILLSAIHAGRADLSCPNNRRXXXXXXXXXXXXXGGWSTDAAAPAGSPLPASFLGALTPSLRTTALLVLTGHAKPEILWLQRLSDAAFRQRVSAIRRRWRESDDPSIEDAAGLAGPLSYGRIRRALLGAAQGEGVALASHDPDGHLFVIRTSSQNDGRRQHGGEEEPAKASTTVRE*