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SCNpilot_cont_300_bf_scaffold_7191_3

Organism: SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Location: comp(1436..5161)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1254432 species="Bacteria; P similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 999.99
  • Bit_score: 1296
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XYY0_SORCE similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 999.99
  • Bit_score: 1296
  • Evalue 0.0
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 999.99
  • Bit_score: 1296
  • Evalue 0.0

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3726
ATGTCGAACGACCTCCGGGCCAGCATCGGTGAGCACATCGGCGGCGCGGACGCGCTCGTCCGGACGTCGGCGGAAGAGCTCGATCCGCTCCCCTCCGTCCTTCCTCCCGAGGGGGTGGTCGTCACGCGCCTCGCCGCGATCGCCGCGCGAAACGACGCGCGGGTCGACGTGGCCGACGTCCGTGGCTCCGCCGACGCTGCGGTCGTCGCTGCGCTCGTACGCGACCCGAGCGCACCCCCGACGGTCGTGATCGCCGAGGACGCCGACGCCGCCCGACGTCTCGCCGGTGACGTCGCGTTCTTGCTCGGTCGCGGCGGTCGCGCCGGTGACCTCGAGGACACGAGCGACGTGCTCGTGCTGGCGATGGCCGAGTCGTCGCCGTATGCCGACGTGAACCCGGACCGGCGCGGCGCGATGGTGCGCATGGCGACGCTCGCGCATCTCGCGGTCGGCCGTCCCTGGCGTGTGCTCGTCGTCCCGGCGGCGGCCCTCGTGCGCAAGCTCGTTCCGCCGTCCGCTCTCCAGGCGCATACGCGACGGATCGTCCACGAGGAGGAGCTCGATCGCGATCGCATCGTGCGTGATCTCGCGGACGCCGGTTGGCTCCGTGTACCCGTCGTCGAGGACCCGGGGACGTTCGCCGTTCGCGGATCGCTGCTCGATGTGTGGGCACCAGGCGCGCCCGAGCCCGCGCGCGTCGAGCTCTACGGCGATCTCGTCGTGTCGATCAAGCCGTTCGACCCGGTGACGCAGACGACGCGCTCCCTCGCGCGCAAACGTGACGAGAGCGACAAACGCGACAAGACGGACAAGACGGACAAGGCCGAGGAGGCGAGCCTCCCCGAGGTCTGGCTCCCGCCGGCTCGCGACGCCATTCTCGCGAAGGACCTCGTCGATCGCGCCAAGCGACGGATCGCGAACCTGTCCGACATGATCGATTGGCCGACGATGAAGACGCGGGTCCTCATCGACGACGTCGCGACCGGACGAGCGTTCTTCGGCGCCGACGGGTTTCTCCCGGCGTACTACGAGGAGCTCGCGCCGCTCTGGCACTACGTCCCGGACGACGCTTGCGTGGTGCTCGCGTCGCCGCCGGATCTCACGCGCGTCGTTCGCGACGAGCTCGCGCGCGCCGAGCAGGACTACGCCGCGAAGGCGGAGGAGCCGAGCTTCATCGTCTCCGCGCACTTCCTCTCCGAGGACGAGGCTGCCCTCGAGCTCGGCAAGCGTCGCGTCGTCGCCCTCCACGGCACGGCGATCGCGGGCGCCGGCGAAGGCCTCGCGGCGTTCGAGACCACGCACGAGCCGATCCACCTGGCGGCCTCCGATCACGCGGACATCACCCGAGCGGTGAAGGCCGCGCGGTCGTCGAAGGGGAAGACGAACGCGCTCGCGCCGGTCGCTCGACGCATCGTCCACTTCAAGGAGAGCGGGCTCCGCGTCTTCCTCACCGCCCGCGCGCAAACGCAGGCCGAACGTCTCGCCGCGCTCCTCCAGCACCAGGGCCTCACGACCCGCGTGCGCGTCACCGGCTTCGATCCGGCCTGGCTCTCGGAGAGCGGAGGCGTCGATCACGACGCCGAGGTGATCGTCGGTCCGCTCGCTCGCGGTGTGATCCTCCCGGGCGAGGGCTACGCGATCGTGACCGAGGAGGAGATCTTCGGCGGCCGAGCGCACCGCGCCCGCGAGAAGAGGTCGCGCGATGCGGCGCGGCCGTTCGTCGAGGACCTCCGCAGCTTGAACGTCGGCGACTACGTCGTCCACGTCGAGCACGGCATCGGTCGGTATGCCGGTCTCGTCCACCGTGACGTCGGCGGGCTCACCGTCGATCTGCTCGTGGTCGAATACTCCGGGGGCGACAAGCTCTACCTCCCGGTCTATCGCCTCAACCAGATCCAGAAATTCTCCGGCAGTGAGGCGGGAGAGCCGAAGATCGATCGCCTCGGCGGCGTGACGTTCGCGAAGACGAAGTCCCGCGTGGAGAAGGCCGTCCGCCAGATGGCGGACGAGCTCCTCCGCCTCTACGCCGAGCGCCAGGCGCAGCCCGGCGACGCGATCGAGGCCGCGAACGACGACTACCGCGCCTTCGAGGCGACGTTCCCGTTCGACGAGACCGACGATCAGTCGCGCGCGATCGAAGAGGTGAACCGCGACCTCGAGACTCCGCGCCCGATGGATCGCCTCGTCTGCGGAGACGTCGGCTTCGGCAAGACCGAGGTCGCGCTCCGGGCGGCGTTCCGCGTCGCGATGAGCGGCAAGCAGGTCGCGGTCCTCTGTCCGACGACCGTGCTCGCGCAGCAGCACTACCGCACCTTCGAGGCGCGGATGCGCGACTACCCGATCTCGCTCAAGGTGCTGTCGCGTTTCCAGTCGAAGAAGGAGCAGGACGAGGCGCTCGCGCTCCTGAAAGACGGCAAGGCCGACGTCGTGATCGGCACCCACCGTACCCACAAGGAGCGCATCAAGCAGCTCCGCACGAACGTCGACGTCCTCACGCTCTCCGCCACGCCGATCCCGCGCACGCTGCAGATGGCCGTGACCGGGATCCGCGACCTGTCGCTCATCACGACCCCGCCGGTCGATCGCCGCGCCGTCCGCACGTTCGTCACGGCGTTCGACGATCAGGTGCTCAAGGAGGCGATCGGCCGCGAGCTCTCGCGCGGCGGTCAGGTGTTCTACGTCTACAACCGGGTCGAGGGCCTCTACGAGAAGGCGCAGAAGGTCCAGCAGCTCTTCCCGAACGCGCGCATCGCGGTCGCCCACGGCCAGATGGGGGGACCGAAGGGGTCCCCACGTACTCGTGGGGATGTGAACAAAGGCGGAAGCAAGGAGGGCACCGAGACCGCGCTCGAGAAGACGATGCTCGACTTCGTGGAGGGCAAGTGTGACATCCTCTGCGCCACCGCGATCGTCGAGAGCGGCCTCGACATTCCGCGCGCGAACACGATCATCATCGATCGCGCCGACCTCTTCGGGCTCGCGCAGCTCTACCAGCTCCGCGGCCGCGTCGGTCGGAGCAGGGAGCGCGCGTATTGCTACCTGATCGTGCCGCCTCCGAACACGATGACCGACGAGGCGCGCGCGAGGATCGAGGCGCTCGAGCGCCACACCGAGCTCGGGAGCGGCTTCAAGATCGCGTCCCTCGATCTCGAGCTCCGCGGCGCTGGCGATCTCCTCGGCGCCGAGCAGTCCGGGAACGTGGCGAGCGTCGGCCTCGATCTCTTCTGCCAGATGCTCGACGAGGCGGTGCACGAGCTTCGCGGCGAGCCGATCGTCCACGACGTCGATCCGGAGCTGTCGTTCGACGTCACTGCGCTCCTCCCGGACGACTACGTCGGCGACGTCGGCGTTCGCCTCTCGATCTACAAGCGCCTCGCGAGCGCGAGCGACGAGGCCGAGGTCGGTCAGATCGCGGTCGAGATGGAGGACCGTTTCGGCGCGCCTCCGGCGGAGGCGAAGTGCCTCGTCCGCCTGATGACGCTCAAGTGCGAGCTGAGGCGGATGCGCGTCCTCGGATGCGAGGCCAACGCCAAGAGCGTCACGCTCCATCTCCGCGACGACACCCCGCTCGATGCCCAGAAGATCCTCGGCCTCGTGAAGGGCAAGGTCTCGCCCTGGAAGATCACTCCGGACATGCGTCTCACGCGCCGCTTCGACGGCTCCGCGAACGGCCTCGTCAACGCGGAGCAGATGCTGGTGGAGCTCTCGCGCTGCTGGAAGGACTGA
PROTEIN sequence
Length: 1242
MSNDLRASIGEHIGGADALVRTSAEELDPLPSVLPPEGVVVTRLAAIAARNDARVDVADVRGSADAAVVAALVRDPSAPPTVVIAEDADAARRLAGDVAFLLGRGGRAGDLEDTSDVLVLAMAESSPYADVNPDRRGAMVRMATLAHLAVGRPWRVLVVPAAALVRKLVPPSALQAHTRRIVHEEELDRDRIVRDLADAGWLRVPVVEDPGTFAVRGSLLDVWAPGAPEPARVELYGDLVVSIKPFDPVTQTTRSLARKRDESDKRDKTDKTDKAEEASLPEVWLPPARDAILAKDLVDRAKRRIANLSDMIDWPTMKTRVLIDDVATGRAFFGADGFLPAYYEELAPLWHYVPDDACVVLASPPDLTRVVRDELARAEQDYAAKAEEPSFIVSAHFLSEDEAALELGKRRVVALHGTAIAGAGEGLAAFETTHEPIHLAASDHADITRAVKAARSSKGKTNALAPVARRIVHFKESGLRVFLTARAQTQAERLAALLQHQGLTTRVRVTGFDPAWLSESGGVDHDAEVIVGPLARGVILPGEGYAIVTEEEIFGGRAHRAREKRSRDAARPFVEDLRSLNVGDYVVHVEHGIGRYAGLVHRDVGGLTVDLLVVEYSGGDKLYLPVYRLNQIQKFSGSEAGEPKIDRLGGVTFAKTKSRVEKAVRQMADELLRLYAERQAQPGDAIEAANDDYRAFEATFPFDETDDQSRAIEEVNRDLETPRPMDRLVCGDVGFGKTEVALRAAFRVAMSGKQVAVLCPTTVLAQQHYRTFEARMRDYPISLKVLSRFQSKKEQDEALALLKDGKADVVIGTHRTHKERIKQLRTNVDVLTLSATPIPRTLQMAVTGIRDLSLITTPPVDRRAVRTFVTAFDDQVLKEAIGRELSRGGQVFYVYNRVEGLYEKAQKVQQLFPNARIAVAHGQMGGPKGSPRTRGDVNKGGSKEGTETALEKTMLDFVEGKCDILCATAIVESGLDIPRANTIIIDRADLFGLAQLYQLRGRVGRSRERAYCYLIVPPPNTMTDEARARIEALERHTELGSGFKIASLDLELRGAGDLLGAEQSGNVASVGLDLFCQMLDEAVHELRGEPIVHDVDPELSFDVTALLPDDYVGDVGVRLSIYKRLASASDEAEVGQIAVEMEDRFGAPPAEAKCLVRLMTLKCELRRMRVLGCEANAKSVTLHLRDDTPLDAQKILGLVKGKVSPWKITPDMRLTRRFDGSANGLVNAEQMLVELSRCWKD*