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SCNpilot_cont_300_bf_scaffold_13768_1

Organism: SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Location: 2..1180

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GLY8_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 402.0
  • Bit_score: 285
  • Evalue 7.80e-74
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Ch UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 397.0
  • Bit_score: 311
  • Evalue 1.90e-81
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 402.0
  • Bit_score: 285
  • Evalue 2.20e-74

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
GTCGGGATCGACGATCTCTATCTCGCAGAGATGGCCGAGAGCTCGGTGCTCACTGCGGCGCAAGAGCTCGAGATCGGCGAGCGCATCGCTTCCGCCGAGCGCACGATCCTCGATGCGCTGTTCACCTGTCCCGCCGGGACGGGAGCCCTCGGAAGGCTGGCGGATGACCTCGAGGCGGGTCGCGCCAGCGCACGGGACCTCATCCTCAACCCGGACCAGGCCGATCTCGACATCAAGGCGACGACCGAGCTCCTCCGTAGCGCGCTCGGCTCCGCCCGCTCGGACGACGACGCCGCGCGCAGGACGGGCGCGTCGGAGATCGCCAAGGTGCGCCTCGACGACGACGTGCTCGCCGCCCTGATCGCGAGCGTGCGGGAGGCGCCGTCTAACGGAGAGGGTGCGGAGATCGACTCTCACGACCTCGATGCACTCGCGACGATCGACCGAGCCGAGGTGGAGATCGAAAGAGCCAAGGGTAGGCTCGTGACGGGCAACCTTCGCCTCGTCGTGCTCTTCGCACGGAAGTACCTCGGGCGTGGGGTCGCGCTGCTGGACCTCGTGCAGGAAGGCAACCTCGGGCTCCTCCGCGCGGCCGACAAGTTCGATCACCGGCGCGGCTTCCGCTTCAGCACGTACGCGGCGTGGTGGATCAAGCAATCGCTCCAGCGCGCCTTGCTCGATCGGACGGTGCGCCTACCCGTGCACGTCGCCGACGACCGGCGGCGCATCGCCAAGCTGCGCGCTGCGTTCGTCGCGCAGCACGAGCGCGAGCCCACGGTCGAGGAGATCTCGGCGCTCGCGAGCCTTGCACCGGAACGTGTCGAGAACATCCTCACGCTTCCCCCGCAGCCGTCGAGCCTCGACATTCCCGTAGGCGAAGACGGTGACGCGCGCCTCGTGGATCTCGTCCCGTCGAACGCTCCACCTCCCGATCAGACCGCGGCGCTCCACGCGCTGGGCGACCACATGGGCGAGCTCCTCGCACGGCTCGACGACCGCGAGCGGCAGATCCTCCGCCTACGCTTCGGGCTCGATCACGCGCGTGAGCACACGCTCGAGGAGGTGGGGAAGCTGCTCCACCTCACGCGCGAGCGGATCCGACAGATCGAGCAGTCCGCCCTCGCAAAGCTCCGCACCATGGCGAGCGCGAAGGAGCTGGGCAGCTACCTCGAAGAGTAG
PROTEIN sequence
Length: 393
VGIDDLYLAEMAESSVLTAAQELEIGERIASAERTILDALFTCPAGTGALGRLADDLEAGRASARDLILNPDQADLDIKATTELLRSALGSARSDDDAARRTGASEIAKVRLDDDVLAALIASVREAPSNGEGAEIDSHDLDALATIDRAEVEIERAKGRLVTGNLRLVVLFARKYLGRGVALLDLVQEGNLGLLRAADKFDHRRGFRFSTYAAWWIKQSLQRALLDRTVRLPVHVADDRRRIAKLRAAFVAQHEREPTVEEISALASLAPERVENILTLPPQPSSLDIPVGEDGDARLVDLVPSNAPPPDQTAALHALGDHMGELLARLDDRERQILRLRFGLDHAREHTLEEVGKLLHLTRERIRQIEQSALAKLRTMASAKELGSYLEE*