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SCNpilot_cont_300_bf_scaffold_16446_9

Organism: SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Location: comp(5757..7799)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 709.0
  • Bit_score: 1003
  • Evalue 1.40e-289
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 709.0
  • Bit_score: 1003
  • Evalue 2.70e-290
DNA-directed RNA polymerase subunit beta' n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RPOC_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 709.0
  • Bit_score: 1003
  • Evalue 9.70e-290

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2043
GAAATGATGACGGTCATCGGCAAGGAGACCGTCACCGATCCCGAGACCGGGAAGGAGCAGGTCGAGCCCCGCTTCAACTCGATCTACATCATGGCGGACTCCGGAGCGCGCGGTAGCACGCAGCAGATCCGTCAGCTCGCCGCTATGCGCGGTCTCATGGCCAAGCCCTCGGGCGAGATCATCGAGAACCCGATCAAGGCGAACTTCCGCGAAGGTCTCTCCGTTCTCGAGTACTTCATCTCGACGCACGGCGCGCGTAAGGGCCTCGCGGACACCGCGCTCAAGACGGCGAACTCCGGTTACCTCACGCGTCGTCTCGTCGACGTCGCGCAGGACGCCGTCATCGCCGAGTTCGACTGCGGAACGCTCGACGGCATCCGCGTGACGAAGCTCGAGGACGCAGGCGAGGTCATCCAGCCGCTCGGCGACCGTATCCTCGGCCGCGTCGCGCTGGAGGACGTCGTCGACCCGCTCACGGGCGAGGTCATCGTCCCGGCGAACTACGGACGCGACCTCGCGCGCGGCTACAAGGTCAACATCGGCGAGGCGATCGGCATCATCGCCAGCCAGTCGATCGGCGAGCCGGGCACCCAGCTCACGATGCGCACGTTCCACATCGGTGGAGCGGCGGCGCGCGGCAAGATCGAGCAGTCCTCGATCGAGGCGCGCACCGAAGGCTTCGTCCGCATCCGCGGCGCGAACCTCGCGAAGCGTCGTGACGGCAGCATCACGGTCATGAACCGCCACGGCGAGCTCGTGATCGTCGACGACACCGGCCGCGAGCGCGAGCACCACCGCCTCGTCTACGGCGCGGTGCTCAAGTGCACCGAGGGCGACAAGGTGAAGCCGGGCCAGCTCCTCGCGGAGTGGGACGCCTTCGCGAACGTCATCCTCACCGAGGTCGGCGGTATCGCGAAGTTCGGCGACATCGTCGAGGGCGTCACGATGATCGAGAAGCTCGACGAGGTCACCGGCCTCTCGCGCAAGGTCGTCATCGAGTCGCGCGCCGCGGATCTCCGTCCGCGCGTCAGCCTCAAGCACCCGGAGACGGGTGACACGATGAAGCTGCCGAACAGCACCCTCGAGGCGCGTTACCTCCTCCCGGTCGGCGCGAACATCGTTGTCCAGGACGGCGACCTCCTCGAGCCGGGCGACGTCATCTCGAAGATCCCGCGCGAGAGCACGAAGACCCAGGACATCACCGGTGGTCTTCCCCGCGTCGCCGAGCTCTTCGAGGCCCGCAAGCCGAAGGATCACGCGATCATCGCGGAGATCGACGGCGAGGTCTCGTTCGGCAAGGACACGAAGGGCAAGCGCAAGGTCGTCATCACGCCGTTCAGCCACGACGGCCAGCCGCTGAACGACCAGGCGCGCGAGTACCTGATCCCGAAGGGCAAGCACATCCACGTCCAGCCCGGTGACCGCGTCCGCGCGGGCGAGCCGCTGCAGGACGGGCCGGCGAACCCGCACGACATCCTTCGCGTCAAGGGCGAGAAGGAGCTCGCGGCGTACCTCGTCAACGAGATCCAGCAGGTCTACCGCCTGCAGGGCGTCGCCATCAACGACAAGCACATCGAGGTCATCGTTCGTCAGATGCTGCGCCGCGTGCGCATCAAGGACGTCGGTGACACGAGCTTCCTCGTCGACGAGAACGTGGAGAAGCACCTGTTCGAGCGCGAGAACTCTCGCGTGATCGAGCGCGGCGGCAAGCCCGGCATCGCCGAGCCGCTCCTCCTCGGCATCACGAAGGCGTCGCTCTCGACGGAGTCGTTCATCTCCGCCTCGTCCTTCCAGGAGACCACCAAGGTCCTCACGGAAGCGGCGATCAACGGCAAGACGGACACGCTGCGCGGCCTGAAGGAGAACGTCATCATGAGACGTCTCATCCCGGCCGGCACGGGCCTCGCGGCGTACAAGGGCCTCAACCTCGTGGTCCCCCGCCGATCCCGCAGCCCCCGCCTTCGCTGGCGGCGGTCAACGAGGAGTAATCCTCGGACAGTGCTCACCGCTCGGCTTGGCTTCGCCTGGCTGAGCGGTGGGTGA
PROTEIN sequence
Length: 681
EMMTVIGKETVTDPETGKEQVEPRFNSIYIMADSGARGSTQQIRQLAAMRGLMAKPSGEIIENPIKANFREGLSVLEYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDAVIAEFDCGTLDGIRVTKLEDAGEVIQPLGDRILGRVALEDVVDPLTGEVIVPANYGRDLARGYKVNIGEAIGIIASQSIGEPGTQLTMRTFHIGGAAARGKIEQSSIEARTEGFVRIRGANLAKRRDGSITVMNRHGELVIVDDTGREREHHRLVYGAVLKCTEGDKVKPGQLLAEWDAFANVILTEVGGIAKFGDIVEGVTMIEKLDEVTGLSRKVVIESRAADLRPRVSLKHPETGDTMKLPNSTLEARYLLPVGANIVVQDGDLLEPGDVISKIPRESTKTQDITGGLPRVAELFEARKPKDHAIIAEIDGEVSFGKDTKGKRKVVITPFSHDGQPLNDQAREYLIPKGKHIHVQPGDRVRAGEPLQDGPANPHDILRVKGEKELAAYLVNEIQQVYRLQGVAINDKHIEVIVRQMLRRVRIKDVGDTSFLVDENVEKHLFERENSRVIERGGKPGIAEPLLLGITKASLSTESFISASSFQETTKVLTEAAINGKTDTLRGLKENVIMRRLIPAGTGLAAYKGLNLVVPRRSRSPRLRWRRSTRSNPRTVLTARLGFAWLSGG*