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SCNpilot_cont_300_bf_scaffold_14957_2

Organism: SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Location: comp(245..1072)

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFY4_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 251.0
  • Bit_score: 252
  • Evalue 6.70e-64
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN98067.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 251.0
  • Bit_score: 252
  • Evalue 9.40e-64
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 251.0
  • Bit_score: 252
  • Evalue 1.90e-64

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGCGCCGCTTCGTCTGGAACTTTCCCTCCAGCCGCCGCCACTCGACGAGCTGCACGCGTTCCGTTCATTCCGGGACGCTCTCGCGGGAGCACGCGAACGGAGAAGACGCTGCTAAGAAGGAGGTCGACGAAAGCGAGGAGGACAGCCCTCTCTCGGATCCGCCCTCCGCACCGTGGAGTGACTTTGCACTTTCACCCGATAGTAGTTCACCATGGCCGGACGTGGCGCTTCCCGACGAGCTCGAAGCCAGACTGATCGAGCGCCTGAGCGCGCGTGACGAACGCGCGTTCAACGAGCTCGTGCAGACCTACGGGCGTCGTGTGTCCGCGCTCGTCCTCCGCATGCTCGGCAACAAGGCGGAGGCGGAGGACCTGACGCAGGAGGTCTTCGTCCAGGTCTTCAAGGCGATCGGCTCGTTCCGAGGCGAGTCGAAGCTGTCGACCTGGATCTATCGAATCGCGGTGAACCTCTGCAAGAACCGCTCGAAGTACCTCAGGGTGCGTCATGCGGGCGAGCAGGACGAGCTCGAGGCCGTGGCGGAGCGAGTTCCGCTCGGCGAAGCTCGACGCGCCAACGTCGCCGTGATCGAACGCCCCGACGAGGCGCTCGGCGGCAAGCAGGTCGAGAAGATCGTCCAGGACGCGATCCAGAAGATCGATCCCGCGTTCCGCGAGTGCCTCATCTTGCGCGACGTCGAGGAGCTCTCCTACGAGGAGATCGAGCAGATCACCGGTCTCGCGGCTGGTACAGTGAAGAGCAGGATCTTCCGGGCACGCGCCCAGCTCAAGGAGATCGTCGAGCGCGAGCTCGGTGAGAAGATCGGATGA
PROTEIN sequence
Length: 276
MRRFVWNFPSSRRHSTSCTRSVHSGTLSREHANGEDAAKKEVDESEEDSPLSDPPSAPWSDFALSPDSSSPWPDVALPDELEARLIERLSARDERAFNELVQTYGRRVSALVLRMLGNKAEAEDLTQEVFVQVFKAIGSFRGESKLSTWIYRIAVNLCKNRSKYLRVRHAGEQDELEAVAERVPLGEARRANVAVIERPDEALGGKQVEKIVQDAIQKIDPAFRECLILRDVEELSYEEIEQITGLAAGTVKSRIFRARAQLKEIVERELGEKIG*