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SCNpilot_cont_300_bf_scaffold_1009_24

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(22440..23465)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2KVM1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 340.0
  • Bit_score: 540
  • Evalue 1.50e-150
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJJ25237.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 340.0
  • Bit_score: 540
  • Evalue 2.10e-150
periplasmic binding protein/LacI transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 329.0
  • Bit_score: 232
  • Evalue 1.90e-58

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGGCCACCATCAAGGATGTGGCGAAAAGGGCAGGGGTTGCAATCTCGACGGCTTCGGCTGCGATCAATCGGTCGGCACCCGTCAGCGACGAGGTCATCGCCAAAGTCGAGGCGGCCGTTCGTGACATCGGCTATGTGCCGCATGAAGGAGCCCGCAGCTTGCGAATGGGGCGTTCACGGCTCATCGGGCTGATACTGCCTGACATCACCAATCCGCATTTTGCCAAGGTCGCCAAGGTGGTCGAATCTGCCTGCCTCACTGCAGGCTATATGGTCGCCGTCTATTCGACAGGCGAGGATCATGCTCGCGAGCAGCAGATATTGACGATGATGCGGATGCAACGGGTCGAGGGGCTCATCATCATCCCGACGCGCTCCGACGCCGCGCATGGCGCGCGCATCGTGGATCAGATCCATGTTCCGACAATCCTGCTCGATAGTTTCGTCGAGGGGTTGCCTTATGATGTGGTGAAGCTCGACAACATTGCCGCGGGCCGTATCGCCACCGAGCATCTGATTGGGCTCGGCCATCGGCGGATTGCCGTCACTGTCGGTCGCGACAATATCGTGACCGGCGAGCATCGCCTGGAGGGTTACAGACAGGCGCTTGCGGCGCATGGCCTGTCGGTTGAGCGAGATCTGCTGCTGGACGGCCGCTTCGACCAGTCCGTCGCTCATGACAGCGTGCTTGCCCGAATGCAGGAACACGACCCGCCGACCGCCATCTTCGCGCTGTCCAACATGATGACGCTCGGCACCTTGAACGCGCTGCACGAGCTGAGACTGTCCGTCCCGCACGACGTATCCGTCATCAGCATCGACGATTTCGACTTTGCCAACATCATGAACCCGCCGCCAACGGTCGTTGCTGCCCCGGTCATGGAAATGGCGCAAGCCGCCATTTCCGCGCTGCTGGACGAGATCGACCGCAAGCATGTGCCGAGCGGCTTGCAGACAGTCTTCGAACCGCGGCTGATCGTTCGAAAATCATGCGCATCGCGACTTACGGCGGCAACTTCTTTGTAG
PROTEIN sequence
Length: 342
MATIKDVAKRAGVAISTASAAINRSAPVSDEVIAKVEAAVRDIGYVPHEGARSLRMGRSRLIGLILPDITNPHFAKVAKVVESACLTAGYMVAVYSTGEDHAREQQILTMMRMQRVEGLIIIPTRSDAAHGARIVDQIHVPTILLDSFVEGLPYDVVKLDNIAAGRIATEHLIGLGHRRIAVTVGRDNIVTGEHRLEGYRQALAAHGLSVERDLLLDGRFDQSVAHDSVLARMQEHDPPTAIFALSNMMTLGTLNALHELRLSVPHDVSVISIDDFDFANIMNPPPTVVAAPVMEMAQAAISALLDEIDRKHVPSGLQTVFEPRLIVRKSCASRLTAATSL*