ggKbase home page

SCNpilot_cont_300_bf_scaffold_1251_10

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

near complete RP 42 / 55 MC: 3 BSCG 42 / 51 MC: 2 ASCG 11 / 38 MC: 2
Location: comp(7046..7672)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EG57_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 181.0
  • Bit_score: 168
  • Evalue 5.60e-39
Regulatory protein LuxR {ECO:0000313|EMBL:CDX36374.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 157.0
  • Bit_score: 232
  • Evalue 5.80e-58
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 178.0
  • Bit_score: 144
  • Evalue 4.20e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGCCTTCGACCGGCGGGAGCGGCTGCGCGTCGGAAGGCCTGGTTCGCAAGTTTGAACAGGCTCTTCGATCAGCGTCCCCTAAGGGGAAAATACGTCTGCCGGTTGCCCATGGCGGGCTGGCGATCGCCGACCGCGACGCCAACCGGTTGTTTCAGGCGGCGGTGACACGGATGCAGCAGGAAACGACGGTCGGCTCCATTCCGGTGCCGGCAATCGGCGACAACGCTGAATTCGTCGTTCACCTGCTGCCGCTGCGGCGGGCCGCCCACGACATCTTCGGCGGCGCCGATACCCTCATTATCGCCACCCCGATCACCCCCACCGCGCTGGTACCGTCCGCCAGTCTTCTCAATGCCCTGTTCGATCTGACACCGACGGAAGCGCGGCTGGCAACTGACCTCGCCAGCGGATTGACCCTGGCCGAGTCCGCAAGCAAGAACGGCGTGACGACCAAATCCGCGCGCACATATCTTGAGCGCATCTTCCGCAAGACCGGCGCGCACAAGCAAGGTCAACTCGTGGCGATGCTGAAAACCGTGCAGCCGCTGGTGACGCCGCCGGCGGACCCGAATTCAATGGCGGGGTCCCGCGCTGGTCCGAACGCTGACGACCATATGAAGTCCTGA
PROTEIN sequence
Length: 209
MPSTGGSGCASEGLVRKFEQALRSASPKGKIRLPVAHGGLAIADRDANRLFQAAVTRMQQETTVGSIPVPAIGDNAEFVVHLLPLRRAAHDIFGGADTLIIATPITPTALVPSASLLNALFDLTPTEARLATDLASGLTLAESASKNGVTTKSARTYLERIFRKTGAHKQGQLVAMLKTVQPLVTPPADPNSMAGSRAGPNADDHMKS*