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SCNpilot_cont_300_bf_scaffold_1730_26

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 25257..25985

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H7Y0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 234.0
  • Bit_score: 274
  • Evalue 1.10e-70
PAS domain S-box protein {ECO:0000313|EMBL:ERF80848.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 234.0
  • Bit_score: 274
  • Evalue 1.60e-70
putative PAS/PAC sensor protein similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 222.0
  • Bit_score: 217
  • Evalue 5.90e-54

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGGTGGAAGCGTCGATCCCCGAATCCGAAGGCGCCGACGACGCGCTGGAGCACGAGCGGATCACGCTGTCGTTCCGGGCCATGGGCGGCGGTCTTTGGGACTACGACATCGAGGCTGACGTCCTCTACTGCAACGCCCGCTGGTACGAGATCCTCGGTCTCGATCCGACGCTGACGCCGGTCACCTCGCTGCAAGCCCTCAAGCCGCACGTGCATCCGGACGACGTCGACGCGGCGACCAGCATCGATCTTGGGGGCGTGAAGGCGCTGTTCGAGCGGGACGAGTGCTATCGCGTCGAGTTCCGCGTCGTGCGGCCGGACGGCGAAGTCCGCTGGCTGCGCTCCGTGGCCTGCATCATCCGCGATTCCGCGACCGACCATATGCGCGCCATCGGCTGCGTCACGGACATCAGCGAGTTCCGACCCGAAGGAGCGATGCACCAGGCAGGCGCGCACAGCTTCGAGACCCTGGCGCCCGGGCCGATGTCGGAGAGGGAGAGCGCGACCGACCCTGAGCCGGACGCCGCCAATCCGCTCAGCCTGAAGGAACGCGAGTGCCTGCGCTGGGTGAGCGTCGGCAAGACCGCCTGGGAGACCGCTAAGATCCTGGGGGTCAGCCCTCGTACGGTGGAGTTCCATCTGCACAACGCGACCCACAAGCTGGACGCGGGCAACAAGGTGCAGGCCGCGTTCATCGCCGTTCGCCGCAGGCTGCTCGACGAAGCCTGA
PROTEIN sequence
Length: 243
MVEASIPESEGADDALEHERITLSFRAMGGGLWDYDIEADVLYCNARWYEILGLDPTLTPVTSLQALKPHVHPDDVDAATSIDLGGVKALFERDECYRVEFRVVRPDGEVRWLRSVACIIRDSATDHMRAIGCVTDISEFRPEGAMHQAGAHSFETLAPGPMSERESATDPEPDAANPLSLKERECLRWVSVGKTAWETAKILGVSPRTVEFHLHNATHKLDAGNKVQAAFIAVRRRLLDEA*