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SCNpilot_cont_300_bf_scaffold_1446_5

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(2920..4332)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=190650 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 470.0
  • Bit_score: 781
  • Evalue 5.80e-223
Transcription termination factor Rho n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Q9A211_CAUCR similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 470.0
  • Bit_score: 781
  • Evalue 4.10e-223
  • rbh
rho; transcription termination factor rho similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 470.0
  • Bit_score: 781
  • Evalue 1.20e-223

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Taxonomy

Caulobacter vibrioides → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGCGGCTCGCGATCCCTTACGAAGATTACCCAATGACCGACGAAACCCCCGACACCGAAGACCTCACCCCCGACCTGGCGGCCGATCTGGCCGGCGACGAAGGCGATGAGGCCAGCGAAATCACCGCGACCATCGCGGCGCTGAACATCACCCGCATGTCGCTGCAGGAGCTCAAGGCCACCTCACCGGCCGACCTGCTGGCCCTGGCCGAGAAGCTGGAGGTCGAGAACGCGAACTCCATGCGCAAGCAGGACATGATGTTCGCGATCCTCAAGACCCTCGCCGAAGAGGGCATCGAGATCTCGGGCGGCGGCACGATGGAAGTGCTGCAGGACGGCTTCGGCTTCCTGCGCAGCCCGGAAGCCAACTACCTGCCCGGCCCCGACGACATCTACGTCAGCCCCTCGCAGATCCGCCGCTACGGCCTGCGCACCGGCGACAGCGTCGACGGCGCCATCCGCGCGCCGCGTGAAGGCGAACGCTACTTCGCCCTGGTCACCGTCACCCAGATCAACTTCGAGCCGCCGGAGAACGTCCGGCACAAGGTTCACTTCGACAACCTGACGCCGCTCTATCCGGAGCAGCGCCTGAAGATGGAAATCGAAGACCCGACCCTGAAGGATCGTTCGGGCCGGATCATCGACATCGTCTCGCCGCTCGGCAAAGGCCAGCGCTGCCTCATCGTCGCCCCGCCGCGCGTGGGTAAGACGGTGATGCTGCAGAACATCGCCAAGTCGATCGCCGCCAACCACCCCGAGTGCTACCTCATCGTTCTCCTGATCGACGAGCGCCCGGAAGAAGTCACCGACATGCAGCGCACGGTGAAGGGTGAGGTGATCTCCTCGACCTTCGACGAGCCCGCGACCCGCCACGTGCAGGTGGCCGAGATGGTCATCGAGAAGGCCAAGCGCCTGGTCGAGCACAAGCGCGACGTGATCATCCTGCTGGACTCGGTGACCCGCCTCGGCCGTGCCTACAACACCGTCGTCCCGTCGTCGGGCAAGGTGCTGACCGGCGGTGTCGACGCCAACGCCCTGCAGCGTCCGAAGCGCTTCTTCGGCGCCGCGCGGAACGTGGAGGAAGGCGGCAGCCTGACCATCATCGCCACCGCCCTGATCGAGACCGGCAGCCGAATGGACGAAGTCATCTTCGAAGAGTTCAAGGGCACCGGTAACTCGGAAATCATCCTCGACCGCAAGGTGGCCGACAAGCGCATCTTCCCGGCCATCGACATCATCAAGTCGGGCACGCGGAAAGAAGAACTCATCACGCCGAAGGATCAGCTGCAGAAGAGCTATGTGCTCCGCCGCATCATGGGCCCGATGGGCGCGCAGGACGCCATCGAGTTCCTCATGGACAAGCTGCGGAACACCAAGAACAACGCCGACTTCTTCCAGTCCATGAACACCTAG
PROTEIN sequence
Length: 471
MRLAIPYEDYPMTDETPDTEDLTPDLAADLAGDEGDEASEITATIAALNITRMSLQELKATSPADLLALAEKLEVENANSMRKQDMMFAILKTLAEEGIEISGGGTMEVLQDGFGFLRSPEANYLPGPDDIYVSPSQIRRYGLRTGDSVDGAIRAPREGERYFALVTVTQINFEPPENVRHKVHFDNLTPLYPEQRLKMEIEDPTLKDRSGRIIDIVSPLGKGQRCLIVAPPRVGKTVMLQNIAKSIAANHPECYLIVLLIDERPEEVTDMQRTVKGEVISSTFDEPATRHVQVAEMVIEKAKRLVEHKRDVIILLDSVTRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNVEEGGSLTIIATALIETGSRMDEVIFEEFKGTGNSEIILDRKVADKRIFPAIDIIKSGTRKEELITPKDQLQKSYVLRRIMGPMGAQDAIEFLMDKLRNTKNNADFFQSMNT*