ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_300_bf_scaffold_2516_8

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(4121..6103)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide transporter, OPT family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T8U8_CAUSK similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 656.0
  • Bit_score: 794
  • Evalue 8.60e-227
  • rbh
OPT family oligopeptide transporter similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 656.0
  • Bit_score: 794
  • Evalue 2.40e-227
  • rbh
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:ABZ72865.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulo similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 656.0
  • Bit_score: 794
  • Evalue 1.20e-226

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caulobacter sp. K31 → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1983
TTGGCCACTGAAACTTCCCGCCGCAACGAACTGACGGTTCGCGGCCTGATCCTGGGCGTCGCCCTCTGCGCCATCTTCACGGCGGCCAACGTCTATCTCGGGCTCAAGGTCGGCCTGACCTTCGCTTCCTCGATCCCCGCGGCGGTGATCTCGATGGCGGCGCTGCGGGCGTTCCGAAACGCCAACATCTACGAGAACAATATCGTCCAGACCGTGGCCTCGGCCGCCGGGGCGATGTCGTCGATCATCTTCGTGCTGCCCGGCCTGTTGATGGTCGGCTGGTGGACGGGCTTCCCGTTCTGGACCTCGTTCTTCATCTGCGCGATCGGCGGGGTCCTGGGGGTGATGTACACCATCCCCCTGCGCCGGGCCCTGGTGACCAACTCCAACCTGCCCTACCCGGAAGGCGTCGCCGCCGCCGAGGTGCTGAAGGTCGGCTCGGGATCGCGCATCGCCGAAGGCCCGGCCGGGGCCGAGGGCAAGGCCGGCGTCGTGGTGCTGAGCGTCACCTCCGTCGCCTCGGCGCTCTATGCGCTGGTGGTGACCTTCAAGGTGTTCGCCGCCGAGGCCGCCAAGTTCGTGAAGGTCGGCGCGGGGGCCACGGGCGTCGCCGGTTCGATGTCGATGGCGCTGCTGGGCGCCGGCCACCTGATGGGCATCGCCGTGGGCATCGCCATGTTCGCGGGGCTGGTGCTGGCCTGGGGCGTCTTCGTGCCGATCCTGTCGATGCACGCCGCGCCGGCCGACAGCGTCGCCGATCTCGCGGGCACGGTCTGGCGGACCCAAGTGCGGTTCATCGGCGCCGGCGCCATCGCGGTCGCCTCCTTGTGGACGCTCGGCCGCCTGGCCGGACCGGTGATCGGGGGTCTGACCTCGGCGCTCGCCGCCTCGCGCGCGGTCAAGGCCGGCAAGGGCGACGAACTGCCGATCACCGAGCGCGACATCCCGATCGGCGTCGTCGGCCTGGTCTGCCTCGCCTGCCTCGCGCCCATCGCCGTGCTGCTGTGGACCTTCCTGAACGGCACCGCCCTTCAGTCGATGATGATCCCGCTGATCATCGCCGCCGTGGTCTACATCGCCCTGGCCGGCTTCCTGGTGGCGGCTGTCTGCGGCTACATGGCCGGGCTGATCGGCTCGTCCAACAGCCCGGTCTCCGGCATGGCCATCCTGGCGGTGCTGGGCGCGGCCCTGGTGATGGTCGGCCTCGCCAAGACGGCGGCCGGCCCGGACGGCGCCCCGGCCCTGATCGCCTTCGTTCTATTCGTCACCGCCGTGCTGCTGGCCGTCGCCGTGGCCGCCAACGACAACCTGCAGGACCTGAAGACCGGTCAGCTGGTCAATGCGACCCCGTGGAAGCAGCAGGTCGGCCTGGTGGTCGGCGTCATCGCCGGCTCGGTGGTGATCCCGCCGGTGCTGGAGCTGCTGAACAAGGCCTATGGCTTCGCGGGCGCCGCCAATGTGAACACCATCACCAACGAGCCCCTCCCCGCCCCGCAGGCGACGCTGATTTCGACGCTGGCGCGCGGCGTGATCGACGGCGGCGTGCGATGGGACCTGATCGGCATCGGTGCCCTGGTCGGCGTCGGCCTGGTGGTGATCGACGAAGTCCTGCGCCGCACCAAGCGCTTCAGCCTGCCGCCCCTGGGCGTCGGCATGGCGATCTATCTGCCAAGCGCGGTGATCGCCCCGGTCGTCGTCGGGGCGGTCGTCGGCTGGCTCTACGATCGCTGGGCGGAGAAGAAGACCCATGGCGAGGCCGCCAAGCGCCTGGGCGTGCTGACCGCCTCGGGCTTCATCGTCGGCGAAAGCCTGTTCAACGTTGCCTATGCGGGGCTGATCGTGGCGACGGGCAAGGATTCGCCGCTGGCGCTGGTGAGCGAGAGCTTCGAGGCCATCGCCCTGCCGCTGGGGCTGGCAAGCCTGATCGCCGTGGTGCTCGGCCTCTACTACTGGACCGAGAAGAAGGCGGCGAACCTGGGGTGA
PROTEIN sequence
Length: 661
LATETSRRNELTVRGLILGVALCAIFTAANVYLGLKVGLTFASSIPAAVISMAALRAFRNANIYENNIVQTVASAAGAMSSIIFVLPGLLMVGWWTGFPFWTSFFICAIGGVLGVMYTIPLRRALVTNSNLPYPEGVAAAEVLKVGSGSRIAEGPAGAEGKAGVVVLSVTSVASALYALVVTFKVFAAEAAKFVKVGAGATGVAGSMSMALLGAGHLMGIAVGIAMFAGLVLAWGVFVPILSMHAAPADSVADLAGTVWRTQVRFIGAGAIAVASLWTLGRLAGPVIGGLTSALAASRAVKAGKGDELPITERDIPIGVVGLVCLACLAPIAVLLWTFLNGTALQSMMIPLIIAAVVYIALAGFLVAAVCGYMAGLIGSSNSPVSGMAILAVLGAALVMVGLAKTAAGPDGAPALIAFVLFVTAVLLAVAVAANDNLQDLKTGQLVNATPWKQQVGLVVGVIAGSVVIPPVLELLNKAYGFAGAANVNTITNEPLPAPQATLISTLARGVIDGGVRWDLIGIGALVGVGLVVIDEVLRRTKRFSLPPLGVGMAIYLPSAVIAPVVVGAVVGWLYDRWAEKKTHGEAAKRLGVLTASGFIVGESLFNVAYAGLIVATGKDSPLALVSESFEAIALPLGLASLIAVVLGLYYWTEKKAANLG*