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SCNpilot_cont_300_bf_scaffold_2452_13

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 8950..9531

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Caulobacter sp. AP07 RepID=J3AU51_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 188.0
  • Bit_score: 224
  • Evalue 8.00e-56
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 186.0
  • Bit_score: 224
  • Evalue 3.00e-56
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABZ71440.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 186.0
  • Bit_score: 224
  • Evalue 1.50e-55

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Taxonomy

Caulobacter sp. K31 → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
TTGACCTCGCCCGACCGCCTCGACGCCGAGCTGGCGCGCGCGGCGGCCGGCGGCGACGAGCGCGCCTACGCCGAACTTGTCCGGCGCCACAAGGACGCGCTCTACCGCTTGCTGCGACGGTATGTGGGTGACGCTGACGAAGCCTATGAGGCCGCACACGACGCGTTCATCGCAGCCTGGAGTGCGCTCGGCCGCTACGACCCCAACCGCTCGTTCGCCGCCTGGCTGAAGACCATCGCGATCAACAAAGCGCGCGACCGCGGCCGGCGATTGGCGGTGAGGCGTTTCTTCTTCGGCTCGAAGTCGCTCGAAGACAGCGGCGCCCTGGACGTCCCGGACGGTGCAACGCCAGCGGAAGCCAAGCTGATGGCGAGACAGCGCGATGCGGCGCTCGAACGGGCCATTGCAGCCTTGCCGGAGGGTCTACGCGGCCCGCTCGTGCTGACCGCCCTGGAGGAGTGCTCGCATCATGAGGCCGGGGAAATCCTCGGCCTCTCTGCCAAGACCGTTGAGATGCGCGCGTATCGGGCGCGGAAGATTCTGGCCCAGACCCTAGACCCCACAAGCCGCCCCTCACGGTAG
PROTEIN sequence
Length: 194
LTSPDRLDAELARAAAGGDERAYAELVRRHKDALYRLLRRYVGDADEAYEAAHDAFIAAWSALGRYDPNRSFAAWLKTIAINKARDRGRRLAVRRFFFGSKSLEDSGALDVPDGATPAEAKLMARQRDAALERAIAALPEGLRGPLVLTALEECSHHEAGEILGLSAKTVEMRAYRARKILAQTLDPTSRPSR*