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SCNpilot_cont_300_bf_scaffold_2875_4

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 3233..6454

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1287086 species="Bacteria; P similarity UNIPROT
DB: UniProtKB
  • Identity: 50.1
  • Coverage: 999.99
  • Bit_score: 931
  • Evalue 7.90e-268
DEAD/DEAH box helicase n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HHY5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 50.1
  • Coverage: 999.99
  • Bit_score: 931
  • Evalue 5.60e-268
  • rbh
dead/deah box helicase domain protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 999.99
  • Bit_score: 927
  • Evalue 3.00e-267
  • rbh

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Taxonomy

Mesorhizobium sp. L103C120A0 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3222
ATGTCCGAAACGGTCGGCCTCGAGACGCTCGTTCCCCATGCGACGGCGCAGCCGGAGACCCGCCCACCGCCTCGTCAGCCTCCGGCGGCGGCGGTGGCGGCCGCGCTTCTTGGCTCGCCGGCGTCACCCCGAACGCGCGTTCACCTGGCGTCGAGCGAACGGCGGGCGGATGAGATCGCCCGGGCCCTGAGCGGTTTCTCGCCGGACGCGGAAGTCATTCTCCTGCCGCCGTGGGACTGTCTCCCCTACGATCGCGCCTCGCCGTCGCGCGATGTCATGGCGCGACGCATGGACGCCATGGCCCGGCTGCTGACCCCCGCGAAGGGGGCCCGATTTCTGATCGTCTCGCCGGAATCGATCGGCCAACGTCTTCCGCCCGCCACGGTGCATGCCGAGGCCTGTTTCGAGGTGGCGCGGGGCGATCGGCTGGATCGTGAGGCGCTTCGCCGGTTCGCGGCCATGACCGGCTATGTCGAGGACGACCGCATCGACGAGGCGGGCGAGATCGCCATCCTCGGCGAGGTCGTCGATGTCTTTCCGGCGGCGGCGGAGGGGCCGGTGCGCATCGTTCTGGGGCAAGGCGACGTCATCGAGGCGATCCGGCCCTATGACGCCCTGACCCAGCGGACGATCGGCGAGCTTGATGGGCTGCGTCTCGGCCCCGCCTCCGAATTGATCGCGCCGTCGGAGGACGTCGCGCCTCGCGCCGCCGGCCTCGAGCATGGCATGGCGGCGCACTACGGCGCCCTGCCGACCCTGTTCGACCTGGTCCCTGAAGCGCTGTTCAGCCGCGACCCCAAGGCCGCCGAGCGCCTGGAGCGCTTTGAGGCGCAGGTGCTCGAGGCGCACGAGGCGCGGATCACCCTGGCGGGCCGGGATGCCGAAGCGCCGCCTCAGCCTTCGGCCCTCTATCTCTTGGGCGACGCGCTTCGGCACGCCTTCAAGGCTTGGTCGACGACAGACCTTGACGCCGACGCCTCCGCCGCCGTGACCCGGCCGTCTGCTGCGCCCAATCCGGGTCGGGCCTTCTGCGACATCGTCGCCGAACAGCGGAACGCGGGACGACGCGTGGTGCTGACCGGCCTGGCTCACGAGCTGCGCGCCTTGGCGCGCGCGCTGGCGCGCGGCCTAGGCGCGACGCCCCAGGCGGTGACCTCTTGGGCCGAGGCGATCGGGGCGCCGGCGGGCGCGTTGGTCGCCCTGGCCGCAGATCTCGACGCCGGTTTCGCCGATGACGCGGCGGGCGTCGTAGTGATCGCGGCGCCGGATGTGATGGGAGGTCGCGTCGCCAAACGGCGGACGAGCGAGGCCTCGATCCTCTTGGCCGAGCCCGAGCTGCGCATCGACGACGTCGTTATCCACGAGGATCACGGCGTCGGGGTGCTCCGCGATCTGGAGACCGTGGTCGTCGACGGCGTCGAGCGCGACACCCTGAAGCTCGAGTACCATGGCGGCGCCAAGCTGCTCGTTCCCGTCGAGGATATCGGACGACTGTGGCGGTATGGCGCGGACGAGACGGCCGTGACCCTCGACCGTCTGCACGGTGAGACCTGGCTGCAGCGTCGGGTCGACGTCAGCCGGCGGATCGACGCCGTCGCCGAGACCCTGGTCGCGGTCGCGCGCCGCCGGCAGGCCGCGCGATGCGATCCGATTGCGCCGCCCAAGGGCGCCTACGCCAGGTTCGCCGCCCGGTTCGCCTTCCCGGAAACCGCTGATCAGGCCGAAGCCATCGAGGCGGTGCTGGCGGACCTGGCGTCTGGCCGACCCATGGATCGGCTCGTCTGCGGCGACGTCGGGTTCGGCAAGACCGAGGTCGCCTTGCGCGCCGCGGCGGCGGTGGCGCTGGCGGGGCGGCAGGTGGCGATGGTGGCTCCGACGACGGTGTTGGCGCGGCAACACGTCGCGACGCTAGAAAGGCGCTTCGCCGGCACGGGTCTTCGCGTCGTGCAGCTTTCGCGTCTGGTGACGGCGGCCGAGGCGAGGACCGCGCGCGCCGCGCTCGCCTCGGGCGAGGCCCGCATCGTCGTCGGCACCCACGCGCTGGCCGCCGAGGAGACCCGCTTTGACGACCTTGGACTGATGATCATCGATGAGGAGCAGAAGTTCGGCGCCGCCATCAAGACGCAGCTGCGAAGCCTCGCCTCCGGCGGCCATCTGCTGACCCTCACCGCGACCCCCATACCCCGCACGCTGCAGGCGGCGATGATCGGTCTGCAGGAGGTCAGCGTGATCGCCAGCCCACCCGCGCGGCGCAGACCCATCCGCACCTTCCTGGCGCCCTATGACGCAGCGACGGTGCGGACGGCGCTGATGCGGGAGAAACGCCGCAACGGTCAGAGCTTCGTCGTCGTTCCCCGCATCGAGGACATCGAGCCGGTCGCCGAACAGCTGCGCGCCCTCGCGCCCGAGCTCGGGCTGAAGATCGCCCATGGCGGCCTGAAGGCGGAGGCGGTGGACCGGGTGATGGTGGCGTTCGCGGACGGCGATGGCGACGTCCTTCTGGCCACCAACATCATCGAGAGCGGTCTTGATGTGCCGCGCGCCAACACCATGCTGATCTGGCGACCCGCCCGGTTCGGCCTGTCGCAACTGCATCAGTTGCGAGGCCGCGTGGGGCGCGGCCGCACCCAGGGCGTCGCCTATCTGTTGTCGGACCCGAAGGACGATCTGTCCGAGGCCACGCGGGCGCGCCTGTCGACACTGGAAGCCTTCGACCGGCTCGGCTCGGGCCTGGCGATCAGCGCGCGCGACCTTGACCTTCGCGGCGGCGGCGATCTGGCCGGGGATGAACAGGCCGGACATATGAAGATGATCGGCGCCGCCCTCTACCATCGCCTGCTGACGCGGGCTGTCCGGGCGGCGCGCGGTGAGCCGGCGCAGGACGAGTGGTCGCCTGAGCTGAGGCTCGGCGAGGGCGGCTCCATGCCTTCGGCCTACGTTCCCGACCCCGTCGTGCGCATCAATCTTCACGCCCGGCTGGCGCGGATGGAAGACCCAAGCGAGATCGACGCCTTTGAGGAAGAGTTGGAGGACCGCTTCAGCGCGCCGCCCCCGCAGGTCGCCGCCCTTCTGGCGCGGGCGCGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATCGTCCGCAAGGACGACCGGATTATCGCCCCCGGCATGCCGTGGGGAAACGGTGACTACCGGGAGATCGAGCGTCTTCTGGCGGCGCTGGCCTGA
PROTEIN sequence
Length: 1074
MSETVGLETLVPHATAQPETRPPPRQPPAAAVAAALLGSPASPRTRVHLASSERRADEIARALSGFSPDAEVILLPPWDCLPYDRASPSRDVMARRMDAMARLLTPAKGARFLIVSPESIGQRLPPATVHAEACFEVARGDRLDREALRRFAAMTGYVEDDRIDEAGEIAILGEVVDVFPAAAEGPVRIVLGQGDVIEAIRPYDALTQRTIGELDGLRLGPASELIAPSEDVAPRAAGLEHGMAAHYGALPTLFDLVPEALFSRDPKAAERLERFEAQVLEAHEARITLAGRDAEAPPQPSALYLLGDALRHAFKAWSTTDLDADASAAVTRPSAAPNPGRAFCDIVAEQRNAGRRVVLTGLAHELRALARALARGLGATPQAVTSWAEAIGAPAGALVALAADLDAGFADDAAGVVVIAAPDVMGGRVAKRRTSEASILLAEPELRIDDVVIHEDHGVGVLRDLETVVVDGVERDTLKLEYHGGAKLLVPVEDIGRLWRYGADETAVTLDRLHGETWLQRRVDVSRRIDAVAETLVAVARRRQAARCDPIAPPKGAYARFAARFAFPETADQAEAIEAVLADLASGRPMDRLVCGDVGFGKTEVALRAAAAVALAGRQVAMVAPTTVLARQHVATLERRFAGTGLRVVQLSRLVTAAEARTARAALASGEARIVVGTHALAAEETRFDDLGLMIIDEEQKFGAAIKTQLRSLASGGHLLTLTATPIPRTLQAAMIGLQEVSVIASPPARRRPIRTFLAPYDAATVRTALMREKRRNGQSFVVVPRIEDIEPVAEQLRALAPELGLKIAHGGLKAEAVDRVMVAFADGDGDVLLATNIIESGLDVPRANTMLIWRPARFGLSQLHQLRGRVGRGRTQGVAYLLSDPKDDLSEATRARLSTLEAFDRLGSGLAISARDLDLRGGGDLAGDEQAGHMKMIGAALYHRLLTRAVRAARGEPAQDEWSPELRLGEGGSMPSAYVPDPVVRINLHARLARMEDPSEIDAFEEELEDRFSAPPPQVAALLARARXXXXXXXXXXXXXXIVRKDDRIIAPGMPWGNGDYREIERLLAALA*