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SCNpilot_cont_300_bf_scaffold_3310_4

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(1512..1943)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Caulobacter sp. AP07 RepID=J3A7R9_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 134.0
  • Bit_score: 188
  • Evalue 4.70e-45
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJL27179.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 134.0
  • Bit_score: 188
  • Evalue 6.60e-45
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 133.0
  • Bit_score: 184
  • Evalue 1.90e-44

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Taxonomy

Caulobacter sp. AP07 → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGGCGGCCGACGATGTGGCGCAGGACGCCTTCATCCTCGGCTTCGAGCAGGTGGCGGAGTTCCGCGGGGAGGGCGCCTTCGCCGGTTGGATCAAGCGCATCGCCGCGCGCCTCTATCTGCGGCGGATGAAGAAGGACGCGCGTCTGTTCCTCACCGACCAGACGCCGGACGAAGAAGATCATTCGGCCCTGGACGAGCCTCGCACGGCCAGCCGCATGGACCTCGACACGGCGCTCAAGGCGCTCTCGGGCGTTGAGAGACTGTGTGTGTCGCTCTGCTACGGCGGGGACCTTTCTCACAGCGAGGCGGCGGAAGCCTTGAATTTGCCTCTCGGCACGGTGAAGTCGCATGTCAAACGTGGTTTGGATAAGCTCCGGGCGAGGCTGGCCCCGGAAGCGGGATTGGGAGCAACGAGGCTCGGTCATGTCTGA
PROTEIN sequence
Length: 144
MAADDVAQDAFILGFEQVAEFRGEGAFAGWIKRIAARLYLRRMKKDARLFLTDQTPDEEDHSALDEPRTASRMDLDTALKALSGVERLCVSLCYGGDLSHSEAAEALNLPLGTVKSHVKRGLDKLRARLAPEAGLGATRLGHV*