ggKbase home page

SCNpilot_cont_300_bf_scaffold_3310_7

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(2838..3380)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAD3_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 176.0
  • Bit_score: 192
  • Evalue 4.10e-46
RNA polymerase sigma-70 factor,ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 176.0
  • Bit_score: 192
  • Evalue 1.20e-46
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylo similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 176.0
  • Bit_score: 192
  • Evalue 5.80e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Phenylobacterium zucineum → Phenylobacterium → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGTCGGGGGACTTGGACGATCGGTCGCTGGCGGAGGCGGCCATGCGCGGCTCGGAAGCCGCGTTCGCGCGCCTGGTGGACCGCCACCAGAGGGCGCTGCGGGCGTTTCTGCGCCGCGCCTGCGCGGGTGATCACGCCCTGGCCGACGACCTCGCCCAGGAAACCTTCATCGCCGCCTGGGGCCGGTTGCACGCCTGGCGGGGCGAGGCCAGCTTCCGCTCCTGGCTGTGCGCCATCGGTTGGCGCAAGTGCGCGGACGCCCGGCGCGGCGCCGGACGCAGCCAGAGGCGCGACGCCGATTGGCTGCAGTCGCAGGACCTGGAGCGGGGGGAGGGCGCCTCGCCCGACGCCCGGCTGGCGGTCGAGCGGGCCCTGGCTGCCCTGCCGCCGGAACAGCGCGCGGCCGTGGCGCTATGCCTCGCCGCCGACTTCTCGCACGCGGAGGCTGCGGTGGTGCTAGGATCGCCCTTGGGTACGGTGAAATCGCACGTGACGCGCGGCAAGGCGCGGCTGGCGGAACTGTTGGGAGCCGCACATGGATGA
PROTEIN sequence
Length: 181
MSGDLDDRSLAEAAMRGSEAAFARLVDRHQRALRAFLRRACAGDHALADDLAQETFIAAWGRLHAWRGEASFRSWLCAIGWRKCADARRGAGRSQRRDADWLQSQDLERGEGASPDARLAVERALAALPPEQRAAVALCLAADFSHAEAAVVLGSPLGTVKSHVTRGKARLAELLGAAHG*