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SCNpilot_cont_300_bf_scaffold_5872_2

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(2694..3254)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D6988C related cluster n=1 Tax=unknown RepID=UPI0003D6988C similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 203.0
  • Bit_score: 203
  • Evalue 1.40e-49
Outer membrane component of tripartite multidrug resistance system {ECO:0000313|EMBL:GAO55177.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 182.0
  • Bit_score: 206
  • Evalue 4.00e-50
RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 186.0
  • Bit_score: 197
  • Evalue 2.90e-48

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
GTGGGCCGCCGGCCCGACGTCGCCGCCGCCCGCGCCCGCGTCGAAGCGGCCGCCCAGCGCGAGCATGTCGCCAAGACGGCCTTCTATCCGAACCTCGACCTCGTCGCGAACATCGGCCTGCAGGCCCTTCCGTCGAACCTGCTGTTCGACAAGGACTCGCCCTACGGCAACTTCGGCCCCGCCTTCACCCTGCCGATCTTCGACGCCGGGGCGAACGAGGCCGGCTACCGCGGCGCCCGCGGCGCCTACGCCGAGGCCGTGGCCACCTACAACAAGACGGTGATCAACGCCTTCCGCGAGGTGGCCGACGCCGTCTCGAACCAGAAGGCTTCCGCCAACCAGCTCGGCGAAGCCCGCGAGGCCCTGCGCGCCAGCGAGGACGCTTACGGTGTCGCCCAGCAGCGCTACGGCGCCGGCCTGGTGCGCAATCTCGACGTGCTCACCGCCGAAGGCCAGGTGCTGACCGCCCGTCGCCGGGTGGCCGACCTGGAAGCCACCGCCTTCAGCCTCGACGTCGCCCTGATCCGCGCCCTTGGCGGCGGATTCCGCGCGGCCGCCTGA
PROTEIN sequence
Length: 187
VGRRPDVAAARARVEAAAQREHVAKTAFYPNLDLVANIGLQALPSNLLFDKDSPYGNFGPAFTLPIFDAGANEAGYRGARGAYAEAVATYNKTVINAFREVADAVSNQKASANQLGEAREALRASEDAYGVAQQRYGAGLVRNLDVLTAEGQVLTARRRVADLEATAFSLDVALIRALGGGFRAAA*