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SCNpilot_cont_300_bf_scaffold_6837_5

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 4106..4624

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H127_CAUCN similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 170.0
  • Bit_score: 208
  • Evalue 5.30e-51
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 170.0
  • Bit_score: 208
  • Evalue 1.50e-51
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AAK24672.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 170.0
  • Bit_score: 208
  • Evalue 7.40e-51

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Taxonomy

Caulobacter vibrioides → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGTCTCTCGACGTATCAGCCAAAAGAAAAATCGCAGCACCCGAAGCAGTGAGACGATTGCCGCTCGCCGACGCCTATTTGCAATGTCGCCCTTGGCTAACGTCGCTCCTTACCCGCCGCTTCGGCCCCGACGAAGCCGCCGACATCGCGCAAGACACCTACCTGCGCATTCACGCCTATGCGCCCCCCTCCCCGATCGAGAACCCGAAGGCGCTCCTGGCCCGGATCGCCCTCAACCTGGCCGCCAATCGTTTCCGCAAGGCGAGCCGCGAAAGCGTCATGGCGCCCGACGCAGAGGTGCTTACTCGCCAGCCGACGCCAAGCTCCCAAGACGAAGCTGTGCTCTTCGAGCAGATGTTGCTCGCCTTACCGGCGAAGTTGCGCGATGTTTTCGTCCTCAGCCATGTGAAGGGCCTGAGCTACCGGGAGATCGCGCAACTGCGTGGGATCTCGGTCAAGGCCGTAGAGAAGCGGATGACCCAGGCGATCGCTCGCTGCGCCGATCTGATCCGGGCCTGA
PROTEIN sequence
Length: 173
MSLDVSAKRKIAAPEAVRRLPLADAYLQCRPWLTSLLTRRFGPDEAADIAQDTYLRIHAYAPPSPIENPKALLARIALNLAANRFRKASRESVMAPDAEVLTRQPTPSSQDEAVLFEQMLLALPAKLRDVFVLSHVKGLSYREIAQLRGISVKAVEKRMTQAIARCADLIRA*