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SCNpilot_cont_300_bf_scaffold_2397_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_67_21_fragment

partial RP 4 / 55 MC: 1 BSCG 10 / 51 MC: 4 ASCG 4 / 38 MC: 3
Location: comp(4917..6104)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: hippocampus abundant transcript 1 protein-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C180EC similarity UNIREF
DB: UNIREF100
  • Identity: 66.6
  • Coverage: 389.0
  • Bit_score: 525
  • Evalue 3.40e-146
Major facilitator superfamily protein {ECO:0000313|EMBL:EJZ20632.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 390.0
  • Bit_score: 516
  • Evalue 2.90e-143
tetA; Tetracycline resistance protein similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 388.0
  • Bit_score: 425
  • Evalue 1.80e-116

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Taxonomy

Rhizobium sp. Pop5 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGATGAACCGCTCCCTTCTTGCCATCTTTGCAACGATCACGCTCGATGCGGCTGGCATCGGGCTGACGCTTCCGATCATTCCAGGTCTGCTGCGCGATGTCGGCCATGTCGGCGATCTCGGCTGGCGGTTCGGAGCCTTCCTGTCGCTCTATGCGCTGATGCAGTTCCTCGCTTCGCCACTTCTCGGCGTGCTTTCCGACCGGATCGGCCGGCGGCCCGTGCTCCTTCTGTCACTTGCTGGCGCCGCGATCGACTATCTCTTCATGGCGTTCGCGCCCTCGCTGATCCTTCTTTTCGTCGGCCGGGCCATCGCCGGCGTTACCGCCTCCAACATGGCGGTCGCTTCCGCCTATATTGCCGACGTCACGCCCGAGCATATGCGGGCGCGCCGCTTCGGCCAGCTCAGCGCCTGTTTCGGCATCGGCTTCATCGCCGGGCCGGTGGTCGGGGGGATGCTCGGCGAGGTCTGGATCCGCGCGCCGTTCCTGGCCGCGGCACTGCTGAACACGGCCAACCTCGTGGTCACCTTCTTCCTTGTCCGCGAATCGCGCGCCGCGGAGCCTGCCGGGACGGCGCGCCCCTCGCTCAATCCGCTCGCCCCGCTCCGCTGGGCGCTGGGCTTTCCCGTGCTGCTGCCTCTGATCGGCGCTTTCGTCGCCTTCAGCTTCATCGGCGAGATCGCCGGCACGATCTGGGTGCTCTATGGCGAAGACCGTTTCGCCTGGAGCCCGGTGACCATCGGCATCTCGCTGGCGGGGTTCGGGCTGCTGCATGCGCTCGCGCAGGCCTTCCTCGCGGGTCCGCTCACCGAGCGTCTCGGGGAGAAGCGAGCTCTCTTCATCGGCATGGCCGCGGACGCCGCCGCCTATAGTCTCATCGCCGTGACGACCGTCGGCTGGATGGCCTTCCTGCTGCTGCCGCTCTTCTGCCTCGGCGGCGTCAGCATGCCGGCCCTCCAGTCGCTGCTGACGGCGCGTGTCGACGGCGATCACCAGGGGCGGCTGCAGGGCGTGCTCGCGTCCATGACGAGCCTCGCCTCGATCTTCGGACCACTCGCGATCAGCAGCCTCTATTTCGCGTCCCGCGCGGTCTTCCCGGGGCTGGTCTGGGTCGTCGGCGCGGCGCTCTATGGCGTCACCATCCCGCTCATCGCCGGCGCCTCAAGGCGCGCAAAACGGGAGGGCTGA
PROTEIN sequence
Length: 396
MMNRSLLAIFATITLDAAGIGLTLPIIPGLLRDVGHVGDLGWRFGAFLSLYALMQFLASPLLGVLSDRIGRRPVLLLSLAGAAIDYLFMAFAPSLILLFVGRAIAGVTASNMAVASAYIADVTPEHMRARRFGQLSACFGIGFIAGPVVGGMLGEVWIRAPFLAAALLNTANLVVTFFLVRESRAAEPAGTARPSLNPLAPLRWALGFPVLLPLIGAFVAFSFIGEIAGTIWVLYGEDRFAWSPVTIGISLAGFGLLHALAQAFLAGPLTERLGEKRALFIGMAADAAAYSLIAVTTVGWMAFLLLPLFCLGGVSMPALQSLLTARVDGDHQGRLQGVLASMTSLASIFGPLAISSLYFASRAVFPGLVWVVGAALYGVTIPLIAGASRRAKREG*