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SCNpilot_cont_300_bf_scaffold_4385_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_67_21_fragment

partial RP 4 / 55 MC: 1 BSCG 10 / 51 MC: 4 ASCG 4 / 38 MC: 3
Location: comp(3909..4562)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8INL6_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 199.0
  • Bit_score: 228
  • Evalue 6.20e-57
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 199.0
  • Bit_score: 228
  • Evalue 1.80e-57
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACL56542.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 199.0
  • Bit_score: 228
  • Evalue 8.70e-57

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Taxonomy

Methylobacterium nodulans → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGGAGACCGCACCGGACAAGACATCGCGCACGCAGGAGGAGCGGACTTTCGCCACCCGCGCCCGCCTCGTCGAGGCAACGCTCGACCTCCTCCTGGCCAAGGGCTATGCCGGGACGACGACGGTCGACATCGCGGCCCGGGCCGGGCTGACGCGCGGTGCGCTCGCCCATCATTACGCCGGCAAGGATGAACTCGTCGTCGAGGCCTTCGACCGTCATCTGACGATCGTCACGCAGGAGATCCGGACCTATGCGACGCTGGTGCGCGACGGCTCGCTGAGCCTCGACGATTTCATCGACCGCGTCTGGACCATCTTTTCGGGGCGCTTCTTCATGCTGACGCTGGAGGAGGTCACGGCGGCGCGGCACAATGACTTCCTGCGTATTCGCCTGGTGAGCCGGACACGGGACTTCCACGACAGCCTCGACGCCATCTGGCGGCAGTTCTTCGACGAGACCGGGCTCAATCCGCTCGAGATCGAGGTGATGCTCAACGCCACGCTGTGCCTGCTGCGCGGCATGGGCGTCCAGACGGTGCTGCGCGACGATCCGGTTTATTTCCGCCGCCTGCTGCGCTTCTGGAAGTCGATCCTCAAGGAACAGATCAAGGCGGCGACAAAGGCCGCGGCCGACAGCAAGGGGAAAGCCGAATGA
PROTEIN sequence
Length: 218
METAPDKTSRTQEERTFATRARLVEATLDLLLAKGYAGTTTVDIAARAGLTRGALAHHYAGKDELVVEAFDRHLTIVTQEIRTYATLVRDGSLSLDDFIDRVWTIFSGRFFMLTLEEVTAARHNDFLRIRLVSRTRDFHDSLDAIWRQFFDETGLNPLEIEVMLNATLCLLRGMGVQTVLRDDPVYFRRLLRFWKSILKEQIKAATKAAADSKGKAE*