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SCNpilot_cont_300_bf_scaffold_549_20

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_65_8

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(14660..15349)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase, catalytic n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IXX6_RHOP2 similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 237.0
  • Bit_score: 205
  • Evalue 6.00e-50
lytic transglycosylase, catalytic similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 237.0
  • Bit_score: 205
  • Evalue 1.70e-50
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABD06934.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 50.2
  • Coverage: 237.0
  • Bit_score: 205
  • Evalue 8.40e-50

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGATCCCGGCTGGACCGGCTCGCGGCCGATTCGCCGGGTTTTCGCTCGCTCTCGCCGGTCTGGCCGCATTCGGCGCGGCCGCCCGCGCCGAGCCTCCCTACACGCCCCCGTCCCGCATCGACATTTTTCGCGCCATCGCCGCGAGAGAGGCGGAGCCGCGAGGCTTGCCGCCGCAGATCGCCGACGCGGTGATGAAAATCGAGAGCGGCTACAATCCCGGCGCGCGCGGCGCGGCCGGCGAGCGCGGCCTGATGCAGGTCATGCCGCCGACCGCGCGGCTCCTCGGCTTCTCCGGAACGGATGACGGGCTCGGCGATCCGGAAACAAACATCCGTCTTGGCGTCCGCTATCTCGCCGAGGCGTGGCGGCTCGCGGGCGGCGACCTTTGCACAGCGCTGATGAAATATCGCGCCGGACACAACGAGACCCGCTTTTCAGTTTTGTCCGTGCGCTATTGTGTAGCGGCCCGCACTCATCTCGCCAGCATCGATTATCCGGTCAGCGGCGTCGTGCCGGAGGCGACCTTCGGATTCAGGGCGGACTCTTTCCGCATGGGCGTCGCCATCGGGACGCAACAGGCGGCGCGACGGCTGGCGCGCGGCGTCCGGCTGCGCAGCCGCGTGGACTGGAAGGCCTATGACCGACGCATGAGAACGCTGGACGCGCGAGCGCGCGCCTTCAGCCTCTGA
PROTEIN sequence
Length: 230
MIPAGPARGRFAGFSLALAGLAAFGAAARAEPPYTPPSRIDIFRAIAAREAEPRGLPPQIADAVMKIESGYNPGARGAAGERGLMQVMPPTARLLGFSGTDDGLGDPETNIRLGVRYLAEAWRLAGGDLCTALMKYRAGHNETRFSVLSVRYCVAARTHLASIDYPVSGVVPEATFGFRADSFRMGVAIGTQQAARRLARGVRLRSRVDWKAYDRRMRTLDARARAFSL*