ggKbase home page

SCNpilot_cont_300_bf_scaffold_350_20

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(18658..19143)

Top 3 Functional Annotations

Value Algorithm Source
spoU; rRNA methylase; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 157.0
  • Bit_score: 242
  • Evalue 5.70e-61
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVC2_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 158.0
  • Bit_score: 185
  • Evalue 5.90e-44
tRNA/rRNA methyltransferase SpoU similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 158.0
  • Bit_score: 185
  • Evalue 1.70e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGCAACTGGCCCTCTTCGAGCCCGACATCCCGCAGAATCTCGGCGCCTTCATCCGGCTCTCGGCGTGCCTGGACGTCCCTCTGCACGTTATCGAACCCTGCGGCTTCCCGGTGGACGACAAGCGGATCCGCCGGGCGTCGATGGACTACTACGACCTCGCGACGGTAACCCGGCATGCCTCCTGGGCGGCCTTCCGGCGTGCCCATCTCGAGGGATGCCTGCTCGAAGGACGCACGGCAGGCCGGCTGGTCCTGCTGACGACGGCCGGCGCGACGCCCCTGCCTGCGGTGCGCTTTCAGCCCGACGACCTCCTCCTGCTCGGCCGCGAAAGTGCGGGGGTGCCGGCCGAGGTCCACGACGCGGCGGAGCTCAGGGTCCGCGTGCCGCTCAAAAAGGGCGCACGCTCCCTCAATGTCGCCCTGGCGGGGGCGATGGTATTGAGCGAGGCGCTTCGCCAGACCTCGGGATTCAAAGACCTCGCATGA
PROTEIN sequence
Length: 162
MQLALFEPDIPQNLGAFIRLSACLDVPLHVIEPCGFPVDDKRIRRASMDYYDLATVTRHASWAAFRRAHLEGCLLEGRTAGRLVLLTTAGATPLPAVRFQPDDLLLLGRESAGVPAEVHDAAELRVRVPLKKGARSLNVALAGAMVLSEALRQTSGFKDLA*