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SCNpilot_cont_300_bf_scaffold_573_28

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(22413..23114)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B38E45 similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 229.0
  • Bit_score: 210
  • Evalue 2.50e-51
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 232.0
  • Bit_score: 168
  • Evalue 3.00e-39
FCD domain protein {ECO:0000313|EMBL:KDD63048.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 232.0
  • Bit_score: 168
  • Evalue 1.50e-38

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
GTGCCTTCCACCCCCTCTCGAAAGCCGATTCCCCTCGGCAAGACCGTCAAATCCCTGCCGGACCTCCTGGCCGAGCGGATTCTCGAAGACATCATGTCCGGCCGCCTGCCGGCGGGTGAACGCCTGAAAGAATTCGCGCTGGCGGACGAGCACGCGGTAAGCCGCGCTACGGTGCGCGAGGCGCTGATTGCTCTGGCCAAGCTTGGCTATGTCGAGCAGGTCCCCCGCTTCGGGGCGCGCGTCGCCCCTTTCGCGAAGGACGACGTCTTCCATTTGTACGAGATCAGGACGGCGTTGCTGGCGATTGCCGCCCGCAACTGCGCGCTCGATCCGGCGGCGCCGCGCGAGGAGCTGGCGGCGCTGACCGCCGAGATGGAGCGGCTGGCCACCGATCCCGACACGCCCGCGCAGGCTTTTTCGGAGCGATCCATCGCGGCGCAGACCCTGCTGGTCAAGGCCAGCGGCAATGGCCGGCTGCCCGCACTCTACGAGCATCTGTCGGAGATCAGCAGCTGGCGGATGATCCGAGGACGCGCCACCAGCTTCCTCAAGGCCGAGCGCCGCCGGGAAGCCGCCAGGGACTGGCGCGTCATCGAGCAGGCGATCCGCGCCGGCGACGCCGATGCCGCCGAAGCCGCCGCCAAGCGCCTCTTCGCCCACTCGTCGGCCGCCGTCCGAGCCGAGCTTCAGGGCACGGAATGA
PROTEIN sequence
Length: 234
VPSTPSRKPIPLGKTVKSLPDLLAERILEDIMSGRLPAGERLKEFALADEHAVSRATVREALIALAKLGYVEQVPRFGARVAPFAKDDVFHLYEIRTALLAIAARNCALDPAAPREELAALTAEMERLATDPDTPAQAFSERSIAAQTLLVKASGNGRLPALYEHLSEISSWRMIRGRATSFLKAERRREAARDWRVIEQAIRAGDADAAEAAAKRLFAHSSAAVRAELQGTE*