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SCNpilot_cont_300_bf_scaffold_969_8

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(9864..11066)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036263DA similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 389.0
  • Bit_score: 500
  • Evalue 2.00e-138
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ERF84217.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 381.0
  • Bit_score: 497
  • Evalue 1.90e-137
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 387.0
  • Bit_score: 493
  • Evalue 7.10e-137

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGCGTACCCATTGGCCTTTTAGGTTGGCTGCGGTTGTTGCGGTTGCCGTCGCTCCGCTCCTGGCGGCGTGTGATGACAAGGCTGCGGCCGAGGCGCCGGCCAAGGCCGCCGCACCGGATGTCGGCATCGTCACGGTGAAGGCCGAGCCGTTCGCGCTGGTGCGCGAGCTGCCGGGCCGCGTGGCGCCGACGCGCGTCGCCGACGTGCGGCCGCGCGTCTCCGGCATCGTGACCGCGCGCATGTTCAATCAGGGCAGCGACGTCAAGATCGGCGATCCGCTCTACCAGATCGATGCGCGTCCGTTCGAGGTCGAATTGCAGGCGAGCGAGGCGGCTCTTGAGAAGGCCAAGGCGGCGCTTGATCTCGCCGTGCCCCAGGCCACGCGGTCGGCAGCGCTTGCCAAGACGCAGGCCATTTCGACGGCGCAGCATGAAATCGCCGTCGCCACGGTCAACCAGGCGAAGGCCGAGGTCGCAGCCCGCGCCGCCGACGTCGAGCGAGCCAAGCTCAATCTCGAATACGCCACCATTCGGGCCCCGATCAGCGGCCGCATCGGTGCGGCGCGCACCAGCGAAGGCGCGCTGGTCGTACAGAACGACACGTCCAATCTCGCGACCATTCAGGCGCTCGATCCGATCTATGCCGACTTCACCCAGTCGGCCGCCGAGCTCAGCAAGCTGCGCCGTGCCGTCGAAGCCGGCGACCTCGAGCGCATCGCGCCCGATGCCGTGAAGGTCCGCCTGCTGCTCGACGATGGCTCGCGCTACCCGCTGACCGGCAAGCTGCTCTTCTCGGAGGCGCGGGTCGATGCGTCGACCGGCCAGGTGACCCTGCGCGGCGAGTTCCTCAATCCCGACAAGGTGCTGTTGCCGGGCATGTATGTCCGCGTCCTGATCGAACAGGGTATCGACAGCGATGCGATCACGCTGCCGGAGCAGGCGATCCAGCGCAACGGCGGCGGCGGCAGCGAGGTGTTCGTGATCAAGGACGACAATCGCACGGCTATCCAGCCGGTTCGCCTGGGCGGACTGCAGGACGGCAAGTGGCTGGTGCTCGACGGCCTGAAGCCGGGTGATCGCGTCGTGGTCGATGGCTTCCAGAAATTCGTGGCTGGCGACGCCGTCAAGCCGCGGTCGTTCAGCCAGTCGGCCGAAGCCAGCGACGACGACAATCCGGTCAAGACCATCAGCGCTACCCGTTGA
PROTEIN sequence
Length: 401
MRTHWPFRLAAVVAVAVAPLLAACDDKAAAEAPAKAAAPDVGIVTVKAEPFALVRELPGRVAPTRVADVRPRVSGIVTARMFNQGSDVKIGDPLYQIDARPFEVELQASEAALEKAKAALDLAVPQATRSAALAKTQAISTAQHEIAVATVNQAKAEVAARAADVERAKLNLEYATIRAPISGRIGAARTSEGALVVQNDTSNLATIQALDPIYADFTQSAAELSKLRRAVEAGDLERIAPDAVKVRLLLDDGSRYPLTGKLLFSEARVDASTGQVTLRGEFLNPDKVLLPGMYVRVLIEQGIDSDAITLPEQAIQRNGGGGSEVFVIKDDNRTAIQPVRLGGLQDGKWLVLDGLKPGDRVVVDGFQKFVAGDAVKPRSFSQSAEASDDDNPVKTISATR*