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SCNpilot_cont_300_bf_scaffold_895_13

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(13900..14163)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, TrbD component n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QDX4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 87.0
  • Bit_score: 148
  • Evalue 2.50e-33
type IV secretory pathway, VirB3-like similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 85.0
  • Bit_score: 148
  • Evalue 9.30e-34
Type IV secretory pathway, TrbD component {ECO:0000313|EMBL:EIG57980.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 87.0
  • Bit_score: 148
  • Evalue 3.50e-33

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Taxonomy

Bradyrhizobium sp. WSM1253 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGACCGAGCCCGTTCCCGGCTTCGTGGTGCCGCTCCACCGTGCCTTGACCGAGCCGATCCTCCTGGGCGGCGCGCCGCGCTCGATCGCGATCCTCAACGGCACGCTCGCTGCGGCGATCAGCTTGGGTCTGCGTCTGTGGGTCGCTGGGCTGGTGCTCTGGCTCATCGGCCACGGTTTGGCTGTCTGGGCGGCCAAGCGCGATCCGCTCTTCGTCGAGGTGGCGCGCCGCCACCTGCGCATCCCCGGCCGGCTCAGCGTGTAA
PROTEIN sequence
Length: 88
MTEPVPGFVVPLHRALTEPILLGGAPRSIAILNGTLAAAISLGLRLWVAGLVLWLIGHGLAVWAAKRDPLFVEVARRHLRIPGRLSV*