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SCNpilot_cont_300_bf_scaffold_1367_1

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: 3..290

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NTS3_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 93.0
  • Bit_score: 80
  • Evalue 1.20e-12
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EZP49023.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 91.0
  • Bit_score: 82
  • Evalue 3.40e-13
DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 94.0
  • Bit_score: 78
  • Evalue 9.90e-13

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
GGCAACGTTGCGCTCGACGTCGACAACCGGACGCTGCGGATCAGCGGCGACATCCAGGTCGTCCGCGAACGCGAACTGGAGTTGCTAGAGCTTCTCATGCGCAACCCGGGCCGAGTCGTGAAACGCGACGCCCTGGCCGACCTGATCTTCGGCAAACATGGGACGCAGGGTGCGGCATCGATCGACGTCTACCTGCATCGACTCCGCAAGGTGTTGGACGACGGTCATGCAACCGTCAGGATTGACAATATTCGCGGCCTCGGCTTCCTGCTGTCCGAGGGCAATTAG
PROTEIN sequence
Length: 96
GNVALDVDNRTLRISGDIQVVRERELELLELLMRNPGRVVKRDALADLIFGKHGTQGAASIDVYLHRLRKVLDDGHATVRIDNIRGLGFLLSEGN*