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SCNpilot_cont_300_bf_scaffold_1547_29

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(24843..25781)

Top 3 Functional Annotations

Value Algorithm Source
Hypothetical protein KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 125.0
  • Bit_score: 90
  • Evalue 8.20e-16
choline dehydrogenase id=12552939 bin=BDI species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 35.1
  • Coverage: 333.0
  • Bit_score: 140
  • Evalue 2.50e-30
Choline dehydrogenase {ECO:0000313|EMBL:CDZ89351.1}; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 316.0
  • Bit_score: 106
  • Evalue 7.20e-20

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Taxonomy

Rhodococcus ruber → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGGCCGCGCGGCGTCGCGGCGCCGAGGCCGGTCTCCGCCAGGGTGACGCCGGCGGCAAGACGCAGCTGCGCCTTCACCAGGTCGACGCCATAGACCTCTTCGGTCACGGTGTGCTCGACCTGCAGGCGTGGATTGGCCTCGATGAAGAAGAACTCCTGCGCGGCATCGTCGACCAGGAACTCGAAGGTGCCGAGGCTGCGATAGTGCACGGCCTTGGCCATGGCGATCGCGGCATCGACGATCCGCAGGCGAAGCGTGGCGCTGAGATGCGGGCTGGGCGCCAGCTCGACGATCTTCTGGTTGCGGCGCTGCAGCGTGCAATCGCGTTCGCCCAACGCCACGATGCCGCCCTGGCCATCGCCTACGATCTGCACCTCGATGTGGCGGGCGCGATCGACCAGCCGTTCGGCATAGATGGCGGGATTGCCGAAGGCGGCCTTGGCTTCGGCGGCGCAGCGCTCGACGGCTTCGGCAATCTCCTCGGCGCGACGCACCGGCCGCATGCCGCGCCCGCCGCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGCCTTGTCGCCGAACAGGTCGAGCTGCTGGGGCGTCGGGCCGACGAAGACCAGGCCAGCCTCGGCGCAGGCCTTGGCGAAGGCGGCATTCTCGGACAGGAATCCGTAGCCCGGATGGACCGAATCGCAGCCGGCTGCCTTGGCGACTGCAATGACACCCGCGATATCGAGATAGGCCGCCGCGCCCCGTCCCTTCAGGGGCTGGACCTCGTCGACACGCCGCACATGAAGCGAGGTGGCGTCGTCCTCGGAATGGACACCGACAGTGGCGATGCCGAGTTCGGCGGCGGCCTGGGCGATGCGGATGGCGATCTCGCCGCGATTGGCGATCAGGAGTTTCTTGAGCATGTTGGCCGTGTCTCGGGGTAA
PROTEIN sequence
Length: 313
MAARRRGAEAGLRQGDAGGKTQLRLHQVDAIDLFGHGVLDLQAWIGLDEEELLRGIVDQELEGAEAAIVHGLGHGDRGIDDPQAKRGAEMRAGRQLDDLLVAALQRAIAFAQRHDAALAIAYDLHLDVAGAIDQPFGIDGGIAEGGLGFGGAALDGFGNLLGATHRPHAAPAAAXXXXXXXXXXXXXXXXGLVAEQVELLGRRADEDQASLGAGLGEGGILGQESVARMDRIAAGCLGDCNDTRDIEIGRRAPSLQGLDLVDTPHMKRGGVVLGMDTDSGDAEFGGGLGDADGDLAAIGDQEFLEHVGRVSG*