ggKbase home page

SCNpilot_cont_300_bf_scaffold_1802_13

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(15203..16354)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VHM5_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 375.0
  • Bit_score: 478
  • Evalue 4.70e-132
Carnitine dehydratase {ECO:0000313|EMBL:ETR78166.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 373.0
  • Bit_score: 494
  • Evalue 1.50e-136
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 375.0
  • Bit_score: 478
  • Evalue 1.30e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
GTGACACTACCGCTCGAAGGGGTTCGTGTGATCGAAGTAGGCCAGGCGCTGGCCGGCCCGCTGGCCGGCGTGCTGATGGCCGACATGGGAGCCGACGTCATCAAGATCGAGAAGCCCGACGGCGGCGACGACGCGCGTATCTGGGGCCCTCCCTTCGGACCGGACGGCGTGACCTCGCTCTACTTCCACAGCCAGAACCGCAACAAGCGCTCGGTCGTGCTCGACCTCAAGCGCGCCGCCGACATCGAGGCGCTGCACAAGCTTTGCGAGACGGCCGACATCCTGATCCAGAATCTTCGGCCCGGTGTCGTCGACGAGATCGGGATCGGCCCCGAGGCGATGCTGAAGCGCCATCCGCGGCTGATCTACTGCTCGATCTGGGCGTTCGGCTATCAGGGCCCGATGCGCATGAAGCCCGGCTTCGATCCGCTGCTGCAGGCCTATGGCGCCATGATGAGCGTCACCGGGCGGCCGGAGGATCCGCCGACCTTCTGCGGCGCCTCGATCAACGACAAGGCGACCGGCATGTTCTGCACCATCGGCGCGCTCGCCGCGCTGCGGTTGCGCGATCGCACGGGCAAGGGCTGCCTGGTTGACACCTCGCTGTTCGATTCGGCGGTGCACTGGGTCGAGGGACAGCTCAACAACTACCTCGCCGACAGCCAGCCGACCAAGCGGCACGGCACGGGATCGGGTGCCATCGTGCCCTATCAGCTCTTCGCCACCACCGATCATCCGGTCTGCCTCGCCGCCGGCAACGATCGCCTGTGGGCGCGCTGCGCCAAGGTGCTGGGGCACCCCGAATGGGCGACCGATCCGCGCTTCGCCACCAGTGCGCAGCGCGTCCGCAACCGCACCGAGCTGGTGCCGCTGATTGCGGCAGTGATGCGCACCAAGAGCCGCGCGCACTGGCTGGCGGCCCTTGAAGAGGTGGGCGTGCCCTGCAGCCCGGTGAACGACATCCCGGAACTTGCGGCGACCGAGCAGCTGCAGGCCGCCGATCTCGTGCATCAACTGCCCGACGGCGGCCCGCGTGTCGTCGGCTTGCCGATCTCCTTCGATCGCACGCGGCCACGCTCGGCGCGCCCGGCACCGACTCTCGGACAGCATACGGAAGAAGTGCTGGGCCATCGCAACGAGCAGCCGAAATGA
PROTEIN sequence
Length: 384
VTLPLEGVRVIEVGQALAGPLAGVLMADMGADVIKIEKPDGGDDARIWGPPFGPDGVTSLYFHSQNRNKRSVVLDLKRAADIEALHKLCETADILIQNLRPGVVDEIGIGPEAMLKRHPRLIYCSIWAFGYQGPMRMKPGFDPLLQAYGAMMSVTGRPEDPPTFCGASINDKATGMFCTIGALAALRLRDRTGKGCLVDTSLFDSAVHWVEGQLNNYLADSQPTKRHGTGSGAIVPYQLFATTDHPVCLAAGNDRLWARCAKVLGHPEWATDPRFATSAQRVRNRTELVPLIAAVMRTKSRAHWLAALEEVGVPCSPVNDIPELAATEQLQAADLVHQLPDGGPRVVGLPISFDRTRPRSARPAPTLGQHTEEVLGHRNEQPK*