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SCNpilot_cont_300_bf_scaffold_1438_6

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: 3829..5241

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Pseudomonas mendocina RepID=UPI000363E890 similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 466.0
  • Bit_score: 450
  • Evalue 2.90e-123
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 466.0
  • Bit_score: 448
  • Evalue 1.80e-123
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:AEB56840.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadace similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 466.0
  • Bit_score: 448
  • Evalue 8.90e-123

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Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGCCTCGCGCCTTGTCCGATCGTCCCCTCACCCGCTCCGCGATGCCGCTGCAGGAGCAGCTCTATCAGCGCATTCGGACGGCGATCGCCAGCCGCCAGCTTTTCGCGGGCGAGAGGCTGCCTGCGGCGCGGACCCTGGCAAGCGACCTCGGCGTCGCCCGCGGCACCGTGGACACCGCCTATGCGCGGTTGATCGGCGAGGGTTATCTGTTGTCGCGCGGCCCGGCGGGAACGGTCGTGTCGCCGGACCTGCAGGCCGGCATCCTGCGATCGCCCGCCACACGGGGCAGGCGGCCGACGGCCCGCGTGCCGCAGACGCCGCAGGAGCCGCTGCCCTTTCAACTCGGTTTGCCCGCGCTCGACGCCTTTCCCCGTGCGCTCTGGGCGCGCCTCACAGCACGCGCCGCCAAGCGGCTGAGCGGTGGTGCCCTCGCTTATCCCGACACGGCCGGTCTCGCCGATCTGCGCGAAGCGATCGCGACTTATCTCGCCGTGTCCCGCGGTGTGCCCTGCCGCGCCGAACAAGTGATCGTCACCAGCAGCTACCAAGCAGGCCTCAGCCTGATCGCCCGCGTATTGCTGCAGCCGGGAGACGGGGTCTGGTTCGAGGAGCCCGGCTACTTCCTCGCCCGCTCCGCGCTCAAGGCCGTGGCGGCCCGCCTGCTGCCTGTCCCGGTCGACGAGCAGGGCATGAATGTCGAGTTCGCCCGCACGCACCTGCCGCCTGCGCGTCTCGCGGTCGTCACGCCGGCGCATCACAGCGCTTTCGGCGTCGCCCTCGCCCTGGCGCGCCGCCAGAAGCTGCTCGCCTGGGCGGCGGAGACCGACGCCTGGATCGTCGAAGACGACTACGACGGCGAGTTCCACTATGTCGGACGCAAGCTACCGGCCCTGAAGAGCCTCGATCTCGCCGATCGTGTGATCTATGCGGGCAGCTTCAGCAAGACGCTCTCTCCCAGCCTGTGCTTGGGCTACCTGGTCGTCCCCGAGCGGCTCGTCGAGCAGACCGTCGAGACCAAGCTTGCCCTCACCAAAGGCGAAGCCGTGCTCGGGCAACGGGTGGTCGCCGACTTCATTGCCGAGGGGCATTTCGGCCGGCATCTCAAGCGCATGCGGGGGCTCTACGCCACCCGGCGGGAGGCATTGGCGATCGCGCTCAGCGACACCTTCGGCGATCGCCTGCGGATGACGGTCCAGCCCGGCGGCATGCATCTGCTGGCGCGCTTTGCCGACGGCGGCAACGACGTCGAACTCGCCCGCCGCGCCGTCCGGCACGGACTGATGCCCAATGCGCTGTCCAGCCAATACATGGAACGTACACGCGACTACGGCCTGATGCTGGGGTTCACCAACATTGCCGAGGAGCAGGCACTGACGAAGGCGAAGGCATTGGCCAACGCGATCGGGTTTTAG
PROTEIN sequence
Length: 471
MPRALSDRPLTRSAMPLQEQLYQRIRTAIASRQLFAGERLPAARTLASDLGVARGTVDTAYARLIGEGYLLSRGPAGTVVSPDLQAGILRSPATRGRRPTARVPQTPQEPLPFQLGLPALDAFPRALWARLTARAAKRLSGGALAYPDTAGLADLREAIATYLAVSRGVPCRAEQVIVTSSYQAGLSLIARVLLQPGDGVWFEEPGYFLARSALKAVAARLLPVPVDEQGMNVEFARTHLPPARLAVVTPAHHSAFGVALALARRQKLLAWAAETDAWIVEDDYDGEFHYVGRKLPALKSLDLADRVIYAGSFSKTLSPSLCLGYLVVPERLVEQTVETKLALTKGEAVLGQRVVADFIAEGHFGRHLKRMRGLYATRREALAIALSDTFGDRLRMTVQPGGMHLLARFADGGNDVELARRAVRHGLMPNALSSQYMERTRDYGLMLGFTNIAEEQALTKAKALANAIGF*