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SCNpilot_cont_300_bf_scaffold_2490_4

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(2572..3525)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5D0_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 291.0
  • Bit_score: 174
  • Evalue 1.60e-40
LysR family transcriptional regulator {ECO:0000313|EMBL:KHS45624.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 306.0
  • Bit_score: 175
  • Evalue 9.80e-41
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 291.0
  • Bit_score: 174
  • Evalue 4.40e-41

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGCACTTCGAGGCGAGAGCGCTGCGCTGCTTCGCCGTCACGGCGCGCGAAGGTTCGGTGAGCCGGGCGGCCGAACGGCTGCGCGTTCGCCAGCCCACCGTCTCGGCCCAGTTGCGCAAGCTCGAACTGGCGCTGGGCTTCTCGCTGCTGCATCGCACGACCCGCCGCATCGAATTGACCAAGGAAGGCAAGCACCTGCTGCCGCTGGTCGAAGCGCTGCTCGCCGACGCCGATCGGCTGAAGCAGGGCGTCGAGGACCTTCGCGGCAAGGCCCGCACCCATCTGCGCCTGGGGAGCGTGTTCTATCTTCAGAACATTCCTGAGCGCGTGGCCTTGCTCGAAGCGTTCGTGGCAGCGCGGCCCGACATTCGCCTCGACGTCGACAGCCGCCTTCAAGCCAGCCATGTCACGGGATTGCTGAGCGGTGAGCTCGAGGCCGCCCTGCTCATGGGCTATCCCATTCCGCGCCGGCGACGCACGACCTGGGGCGACGGCGAACTCGAGTTTCCCGCCGAGCTGCCCCGTCTCGTGCTCAGCCAGAGGACTCTCTCCCTGCTGGTGCCGCCGGCCTCGCCGCTTGCCCGGCTGCCGTCACTCACGCTGGCATCGCTCGCCGGCCAATCGATCCTGGTGCCCGGCCCCGATCATGGGCACGAATTCGTGGCAGCGGTATCGGCGTTCCTAGCACGCGCCGGCGCCACGGGGATCGTGCCGGCGGAGAACACCGAAGAGGCCCTGGCGCGCCAGGCGCGCCGGTCGAACCTGCCGGCCCTCTCCTTGGGCTGGTTCCGTGCGTCCGGCGAAGCCCGGGGCGAACTCCTGCGCAAGCCGGTCGACGGGCTCGATCTGCAGACCGAGCTGGCCCTGGTCTTCGGCAAGAGCAGCCTCGGCCGCCCGGCCCGCGCCCTTCGCGCCTTCGCGCGCAAGTTCGCAGCCGCCAACCGGTCCGGCTGA
PROTEIN sequence
Length: 318
MHFEARALRCFAVTAREGSVSRAAERLRVRQPTVSAQLRKLELALGFSLLHRTTRRIELTKEGKHLLPLVEALLADADRLKQGVEDLRGKARTHLRLGSVFYLQNIPERVALLEAFVAARPDIRLDVDSRLQASHVTGLLSGELEAALLMGYPIPRRRRTTWGDGELEFPAELPRLVLSQRTLSLLVPPASPLARLPSLTLASLAGQSILVPGPDHGHEFVAAVSAFLARAGATGIVPAENTEEALARQARRSNLPALSLGWFRASGEARGELLRKPVDGLDLQTELALVFGKSSLGRPARALRAFARKFAAANRSG*