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SCNpilot_cont_300_bf_scaffold_2490_9

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(6206..7093)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcription regulator protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IPN7_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 287.0
  • Bit_score: 305
  • Evalue 5.50e-80
  • rbh
LysR family transcription regulator protein similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 287.0
  • Bit_score: 305
  • Evalue 1.50e-80
LysR family transcription regulator protein {ECO:0000313|EMBL:ADJ64934.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 287.0
  • Bit_score: 305
  • Evalue 7.70e-80

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Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGGAACTTCGCCATCTCCGCTACTTCGTCGCCGTCGCGCGCGAGGGTCATGTCACCCGCGCGGCGGAGAAGCTCCACATCCAGCAGCCGCCGCTTTCCCAACAGATCCGCGCCCTCGAACGCGAGATCGACGCGCCGCTCTTCGTCCGCCATCCGCGCGGCGTCAGCCTGACCGATGCCGGCCGCTCCTTCCTTGCCGACGCCGAGGCGATCCTCGCTTCGGTCGACCGGGCCGTGGTGCGGGCGCGGCGCACCGCGCGTGGCGAGACCGGCCGGATTGCCGTGGGCTTCACGACCTCGGCGCCCTTCCATCCGCTGGTGGCGCGCGCGATCCGTGAGTATCGCGCCCAGCGTCCCGACATTTCCTTCGTGCTGGAGGAGAGCAGTTCGGGCGAGCTCCTGGCCGGCCTGCGCGACGAGCGGCTCGATATCGCTTTCATCCGCTCCGGCCTCGCCGATCCGCAGGGGCTGAGCGTTCAGCCCCTGCTGCAGGAGGAGATGGCGGCTGCCTTGCCGACCCGCCACAAGCTCGTCAGGCGGCCGCGCCTCACCTTGAAGGATCTCGCGTCCGAGGATCTCATCCTCTACCGCCGCCCCGACGGGCGTGGCCTCTACGACGTGATCATCGCGGCCTGTGCGGAGGCCGGCTTCAGTCCGCACATCTCGCAGGAAGCGCCGCGCATCGTCTCGACCCTCAATCTCGTGGCCGCTGGCCTGGGGATCACCATCGTGCCGGCTTCCTTGAGTCGCCTCCCCCTGGAGGGTGTAACCTACCGCCCGCTCACCGGGCGGCCCGCCCTCAAGGTGCCGCTCAATCTTGCCTGCCGCCGCGACGAGCATTCGGCCGCGACGCTGGGCTTTATCGACCTGGTGCGGCGTCTGGCATGA
PROTEIN sequence
Length: 296
MELRHLRYFVAVAREGHVTRAAEKLHIQQPPLSQQIRALEREIDAPLFVRHPRGVSLTDAGRSFLADAEAILASVDRAVVRARRTARGETGRIAVGFTTSAPFHPLVARAIREYRAQRPDISFVLEESSSGELLAGLRDERLDIAFIRSGLADPQGLSVQPLLQEEMAAALPTRHKLVRRPRLTLKDLASEDLILYRRPDGRGLYDVIIAACAEAGFSPHISQEAPRIVSTLNLVAAGLGITIVPASLSRLPLEGVTYRPLTGRPALKVPLNLACRRDEHSAATLGFIDLVRRLA*