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SCNpilot_cont_300_bf_scaffold_2104_4

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: 2140..2931

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase, Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 253.0
  • Bit_score: 451
  • Evalue 1.00e-123
Pseudouridine synthase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IDM4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 263.0
  • Bit_score: 313
  • Evalue 2.30e-82
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 268.0
  • Bit_score: 308
  • Evalue 1.60e-81

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
GTGAGCGAACCCGAAAGAATTGCCAAGCGCCTGGCGCGTGCCGGCCTCTGCTCGCGCCGCGATGCCGAACGCTGGATCGAAGCCGGCCGCGTGAAGGTCGACGGCAAGGTGCTGGAAACTCCGGCCTTCGTGGTCACCGACCAGAACGTCATCGAGGTCGACGGCAAGCCCTTGCCGCAAGCCGACCGGGCCCGCCTGTGGCGCTATCACAAACCACCCGGTGAAATGGTGACGGCCCGCGATCCCGAGGGCCGGCGCACCATCTTCGATTCGCTGCCCAAGGGTATGCCGCGCGTGGTCACGGTGGGTCGCCTCGACTTCATGTCGGAGGGCCTGCTGCTGCTGACCAATGACGGCGGTCTGGCGCGCCGGCTGGAGCTGCCCGCCAACGCCTGGACACGGCGCTATCGCGCGCGCGTGCACGGCGCGGTCGACGAGGCGCGGCTGGCAGCCCTCGCCGACGGCATCACCATCGAGGGCGTGCGCTATGGCGCGATCGAGGCCTCGCTCGATCGCCAGCAGCGCTCCAATGCCTGGCTCGACATCGCCCTCACCGAAGGCAAGAACCGCGAAGTGCGCCGGGTGCTGGCCCATCTCGACCTGCCGGTCGTGCGCCTGATCCGTGTCGCTTTCGGGCCGTTCCATCTCGGCGAGCTCGAGCGCAACCATGTCGACGAGGTCCCGGCCCAGGCGCTCGACAACCTGCTGGGCCTGAAGCGGCCGGCCCGCAAGGAGGGCTGGGCCAAGCCGCAGCCGCGACCGGCCGCCCAGGCCAAGCGTCGCCGTCACTGA
PROTEIN sequence
Length: 264
VSEPERIAKRLARAGLCSRRDAERWIEAGRVKVDGKVLETPAFVVTDQNVIEVDGKPLPQADRARLWRYHKPPGEMVTARDPEGRRTIFDSLPKGMPRVVTVGRLDFMSEGLLLLTNDGGLARRLELPANAWTRRYRARVHGAVDEARLAALADGITIEGVRYGAIEASLDRQQRSNAWLDIALTEGKNREVRRVLAHLDLPVVRLIRVAFGPFHLGELERNHVDEVPAQALDNLLGLKRPARKEGWAKPQPRPAAQAKRRRH*