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SCNpilot_cont_300_bf_scaffold_1239_28

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 21706..22269

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J849_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 185.0
  • Bit_score: 232
  • Evalue 3.70e-58
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 185.0
  • Bit_score: 232
  • Evalue 1.00e-58
TetR family transcriptional regulator {ECO:0000313|EMBL:KEA06034.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobac similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 185.0
  • Bit_score: 232
  • Evalue 4.00e-58

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGTCAGAATCGCATCGCCGCAAGAAACAGCCTGAACGTGTCCGCCGGCAACTCGTCGATGTCGCCGCGCGCATCGCTTCCGAGCAGGGGGTGGGCGCCGTCACCCTCGACGCTGTGGCCCAGGCCGCCGGCGTCAGCAAGGGCGGGCTGCTGCATCATTTTCCCGGCAAGCTGCCGCTGCTCGACGGATTGTTCGAGCATCTGGTCGAGGAGTTCGACCGGGCGCTGGCCGAGGAAATGCGCCAAGATCCGGTGGCGCAGGGGCGATTTTCCCGCGCCTATCTGCGCGTCGTCGCCGACCTGCGCGACAACCCGGTCGAAAGCCGGCAATGGGCGGGCCTGACCATGGCGATGCTGAACGAGCCGCATCTGCGCGAGCGCTGGCGGGCTTGGGTCGAGCAGCGCAACACCGATTATGTCGGCACGGATTCCTCCGTTTCCGCTCTCATCGTCCGACTCGCCGCCGACGGGCTCTGGCTTGCGGACGTCACCGATTGCCAGACGATCGACCCGGAGGCGCGCAAGGCGCTGGTCGAGCGACTGGTGGCGATGACGCTGGCCTGA
PROTEIN sequence
Length: 188
MSESHRRKKQPERVRRQLVDVAARIASEQGVGAVTLDAVAQAAGVSKGGLLHHFPGKLPLLDGLFEHLVEEFDRALAEEMRQDPVAQGRFSRAYLRVVADLRDNPVESRQWAGLTMAMLNEPHLRERWRAWVEQRNTDYVGTDSSVSALIVRLAADGLWLADVTDCQTIDPEARKALVERLVAMTLA*