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SCNpilot_cont_300_bf_scaffold_1255_28

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 29026..29523

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00035FDED0 similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 151.0
  • Bit_score: 163
  • Evalue 2.50e-37
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 149.0
  • Bit_score: 150
  • Evalue 4.60e-34
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAK67556.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 149.0
  • Bit_score: 150
  • Evalue 2.30e-33

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGATGACCTTCCGGCGACCATCGCCGCCGCCTTACGACGCCGCGAGGCTCGAGCCCGCGTTGCGCCGCTACTTCCGGCGGCGCGCGGCGGCGCATGAGGTGGAGGATCTCGTCCAGGAGGTATTCATCCGCCTGCAGAGCCGCCGCAGCGAAGAGGCGGTGGAGGACATGGACCGCTACGTCTTCGTCGTCGCCGCCAACGTCCTGATGCGCCGCTACCGCAAGGAAAGGCAGTGGAACCAGGGCGTCGAGGCGGCCTCCGACGACCAGGACGAGCCCATCTCGCCGGAGCGCGTGCTGCTGGGGCGCGAGAAGCTGGACAGGGCGCTGGCCGTCCTGCAGCGGTTGCCCGCCAGGACGCGCCAAATCTTCATCCTCCATCGGTTCGAGGATATGACCTATCCGCGCATCGCCGCCTCCCTCGGGATATCCAAGAGCGCCGTCGAGAAACACATGATCCGCGCGCTCAAGGCCCTGCACGACCAGGGAGACGACTGA
PROTEIN sequence
Length: 166
MMTFRRPSPPPYDAARLEPALRRYFRRRAAAHEVEDLVQEVFIRLQSRRSEEAVEDMDRYVFVVAANVLMRRYRKERQWNQGVEAASDDQDEPISPERVLLGREKLDRALAVLQRLPARTRQIFILHRFEDMTYPRIAASLGISKSAVEKHMIRALKALHDQGDD*