ggKbase home page

SCNpilot_cont_300_bf_scaffold_1489_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(6846..8459)

Top 3 Functional Annotations

Value Algorithm Source
Choline dehydrogenase-like flavoprotein n=1 Tax=Rhizobium sp. CF122 RepID=J2JA09_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 537.0
  • Bit_score: 1002
  • Evalue 2.20e-289
  • rbh
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:EJL57903.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; R similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 537.0
  • Bit_score: 1002
  • Evalue 3.10e-289
choline dehydrogenase protein similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 535.0
  • Bit_score: 987
  • Evalue 2.10e-285
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1614
ATGAGTGAGGCACCGCTGGATGACGGCGTTTACGATTTTATCGTCGTGGGCGCCGGATCGGCCGGCTGTGTGCTCGCAAACCGGCTTTCGGCGGATCCGAAAAACCGGGTGTTGCTGCTCGAGGCCGGCGGCTCGGATCGCTATCACTGGGTGCATGTGCCGATCGGCTATCTCTACTGCATGGGCAATCCACGCACCGACTGGATGATGAAGACGGCGGCGGAGGCCGGCCTTAACGGCCGCGCCTTGAACTATCCGCGTGGCAAGGTGCTGGGCGGCTGCTCTTCCATCAATGGCATGATCTATATGCGCGGGCAGGCCGCCGATTACGATGCCTGGCGGCAGGCGGGCAATGCCGGCTGGGGTTGGGACGATGTTCTGCCATGGTTCCTGAAGTCTGAGGACAATTATCGCGGCCGATCGGCCCTGCACGGCGCCGGCGGCGAATGGCGCGTCGAGCGGCAGCGATTGTCCTGGCCGATCCTCGATGCCTTTCGCGATGCGGCCGAGGAACTCGGCATCCCCAAGACCGAGGACTTCAACGGGGGCGACAATGAGGGATCCGGTTATTTCGAGGTCAACCAGAAGGGCGGCCTGCGCTGGAACACGACCAAGGCCTTCCTGCGCCCGGCGATGAAGCGGCCGAACCTGCGCGTGTTGACCGGCGCGGAGACCGAGCGGCTGGAATTCGACGGCAAGGCGGTAGCCGGCGTGCGTTTCCGCCGCGCTGGCCGCGCCTGCATGGCGCGCGCCACACGCGAGGTGGTGCTGGCGGCCGGCGCGATCAACTCGCCGAAACTCCTGGAACTGTCAGGTGTCGGCCGGCCGGAAGTCCTTTCGGCGCTTGGCATTCCCATTCATCATGCGCTGCCCGGCGTCGGCGAAAACCTGCAGGACCACCTGCAGATCCGCACCGTCTTCAAGATCGAGGGCGCGCGCACATTGAACCAGATCTATCACAATCTCTTCAGCCGCGCCGGCATGGGCCTGCAATATGCGATCCGCCGGTCCGGCCCCCTTTCCATGGCCCCGAGTCAGCTGGGCATTTTCGCCAGGAGCGATCCGGCGGTGGCGACGGCGGATCTCGAATATCACGTCCAGCCGCTTAGCACCGACCGGCTGGGCGAACCCCTGCATCGCTATCCCGCTGTAACCGTTTCGGTCTGCAATCTGCGCCCGGAAAGTCGCGGCACCGTGCATGTGACGACGAAGGATGTCACGACGGCCCCGGAAATCCGGCCCAACTACCTCTCGACGCCAGGCGACCGGCTGCTGGCGGCCCGCGCCATCCGCCATGCGCGTCGATTGATGGAAACCCAGGCGATCTCCCGTTTCCGTCCGCAGGAGATGCTTCCCGGACGGGAATACCAGAGCGACGAAGACCTCATTCGCCGCGCCGGCGATATCGCCACGACGATCTTCCACCCCGTCGGCACCTGCAAGATGGGAAGCGATCCGATGGCGGTGGTGGATTCGGTGTTGCGCGTGCACGGGCTGGAAAAGTTGCGCGTCGTCGACGCCTCGATCATGCCGACGATCGTTTCGGGCAACACCAATTCGCCCGTCATCATGATTGCCGAGAAAGCAGCCGAGGCTATTTTACGCGCAGAGTGA
PROTEIN sequence
Length: 538
MSEAPLDDGVYDFIVVGAGSAGCVLANRLSADPKNRVLLLEAGGSDRYHWVHVPIGYLYCMGNPRTDWMMKTAAEAGLNGRALNYPRGKVLGGCSSINGMIYMRGQAADYDAWRQAGNAGWGWDDVLPWFLKSEDNYRGRSALHGAGGEWRVERQRLSWPILDAFRDAAEELGIPKTEDFNGGDNEGSGYFEVNQKGGLRWNTTKAFLRPAMKRPNLRVLTGAETERLEFDGKAVAGVRFRRAGRACMARATREVVLAAGAINSPKLLELSGVGRPEVLSALGIPIHHALPGVGENLQDHLQIRTVFKIEGARTLNQIYHNLFSRAGMGLQYAIRRSGPLSMAPSQLGIFARSDPAVATADLEYHVQPLSTDRLGEPLHRYPAVTVSVCNLRPESRGTVHVTTKDVTTAPEIRPNYLSTPGDRLLAARAIRHARRLMETQAISRFRPQEMLPGREYQSDEDLIRRAGDIATTIFHPVGTCKMGSDPMAVVDSVLRVHGLEKLRVVDASIMPTIVSGNTNSPVIMIAEKAAEAILRAE*