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SCNpilot_cont_300_bf_scaffold_1470_21

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 19422..20051

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003711B9B similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 183.0
  • Bit_score: 238
  • Evalue 4.50e-60
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAK72773.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium g similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 195.0
  • Bit_score: 237
  • Evalue 1.40e-59
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 195.0
  • Bit_score: 232
  • Evalue 9.00e-59

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGTCAATACGCAGTTCGAAAATTACGAATCCCGTTGTGACGGAAGAATTGGCCGGAAATGCGAACGGCGGCAAAACTCGTCCGCGCGAGCGCATCGTTTCCGCCGCCTGCACGCTGTTTCGCGAAAACGGCATCCGCGCCACCGGCGTGGAGGCCATCGCCGAGGCCGCCGACACCAACAAGATGACGCTCTATCGCCATTTCGGCTCCAAGGACGAGCTGATCTGCGAAGCGCTGAAATGCATCTCGGATCGCCATGCCGCCTTCTGGGAAAAACTGACGGCGGATTTTCCCGACGATTCGCAGGCCCGCCTGCTGGCCTGGGTAGAATTGCGCGCCGCCTCGCTGGTGGACGAACCGCATGGCTGCGACCTCAGCAACGCCGCCGTCGAGCTGAAGGAAACCGACCATCCCGCTCATGCCGTCATAGAGCAGGTGAAGGCGGCCCAGCATCGTCGCCTCGTGGCTCTGTGCGCCGACGCCGGCAGCCGCGACCCGGATCTTCTGGCCAATACACTTGCCATGCTGCTGGAAGGCGCGCGCGTCAGCCGCTGCGCTTCCGGGGCGGAAGGGCCGTGCAGACAATTTTCCCGCGCCTGTCACGCCGCCATCGCTGCCTTTCGAAATTAG
PROTEIN sequence
Length: 210
MSIRSSKITNPVVTEELAGNANGGKTRPRERIVSAACTLFRENGIRATGVEAIAEAADTNKMTLYRHFGSKDELICEALKCISDRHAAFWEKLTADFPDDSQARLLAWVELRAASLVDEPHGCDLSNAAVELKETDHPAHAVIEQVKAAQHRRLVALCADAGSRDPDLLANTLAMLLEGARVSRCASGAEGPCRQFSRACHAAIAAFRN*