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SCNpilot_cont_300_bf_scaffold_1470_28

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(24942..25346)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B6A477_RHILW similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 126.0
  • Bit_score: 173
  • Evalue 1.10e-40
HTH family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 134.0
  • Bit_score: 172
  • Evalue 9.20e-41
Putative HTH family transcriptional regulator {ECO:0000313|EMBL:CAK03555.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 134.0
  • Bit_score: 172
  • Evalue 4.60e-40

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
GTGAAAAGCCAGCCTCACAATGTCGATATCCAGGTCGGCAAGAAAATTCGCAACCAACGGATGATCAGCGGCATTTCCCAGTCGGAACTGGGAGATCGCATCGGTGTGACCTTCCAGCAGATCCAGAAGTATGAAAAGGGCGCCAACCGCGTCAGCGCCAGCCGTCTCGTCGAGATCGCCAATGCGATGAGCATCGACGTGCGCAGTTTCTTCGACGAATTCGACGCCAGCACTTCGAGCAACGACAACCAGGCCGCCAAGGACGAGTTCGTCGTGTCGCGCCAGGGGCTTCAGCTTAACGCGGCTTTCCTCTCCATCAAGAACGAAGCGGTTCGCACGCGCCTGCTCAAGCTGGTTCAGGAAATCGCGCATTCGGAAGCCGGCACGTCGCGCGACGCCGACTGA
PROTEIN sequence
Length: 135
VKSQPHNVDIQVGKKIRNQRMISGISQSELGDRIGVTFQQIQKYEKGANRVSASRLVEIANAMSIDVRSFFDEFDASTSSNDNQAAKDEFVVSRQGLQLNAAFLSIKNEAVRTRLLKLVQEIAHSEAGTSRDAD*