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SCNpilot_cont_300_bf_scaffold_2123_18

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(14814..15551)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 245.0
  • Bit_score: 401
  • Evalue 1.10e-108
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J9V8_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 245.0
  • Bit_score: 401
  • Evalue 7.90e-109
16S ribosomal RNA methyltransferase RsmE similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 245.0
  • Bit_score: 401
  • Evalue 2.20e-109

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCGTGCCAACTTCAGAATGCAGCGGCTTCATGTCGAGACGGACCTGCGCAAGGACGCGCCGGTCGAGGCCGACAAGGAGCAGTTCCACTATCTCGCCAATGTGCTGCGCGCCGAAGCCGGACAGGACGTGCTGCTGTTCAACGGCCGCGACGGTGAGTGGATCGCCAGGCTCGCCTTCCCGACCCGCAAGCGTATCGAGATGACCCCGGTCGAACTGGCCCGCCCGCAGCCGCAGCCATCCGACCTGCATTATCTCTTCGCGCCGCTGAAGGTCGGGCGGCTGGATTATCTGGTGCAGAAGGCCGTGGAAATGGGCGCCGGCCTGCTGCAGCCGGTGATGACCCAGCATGTGCAGGGCAAGATCACCAGCCTGGACCGGCTAGAGGCGAATGTGATCGAGGCGGCAGAGCAATGCGGCATCCTGTCGATTCCGCGCGTCGCCGCTCCCGTCAAGCTGCGCGACCTGCTCGACAGCTGGCCGCAGGACCGGCGCATCATCTATTGCGACGAGGGCGATGCCGGGCAGAACCCGCTGCCGGTGCTGGCAAACGTCAAGGAGCGCAAGCTGGCATTGCTGATCGGGCCGGAAGGCGGCTTTTCCGAGGAGGAGAGGCAATGGCTTCGCAGCCTCGATTTCGTCACCGCCATTCCGCTGGGGCCGCGCATCCTGCGCGCCGATACCGCCGCGGTCGCCGCCATGGCCGTGGTGCAGGCCGCCATTGGCGACTGGCGCTAG
PROTEIN sequence
Length: 246
MRANFRMQRLHVETDLRKDAPVEADKEQFHYLANVLRAEAGQDVLLFNGRDGEWIARLAFPTRKRIEMTPVELARPQPQPSDLHYLFAPLKVGRLDYLVQKAVEMGAGLLQPVMTQHVQGKITSLDRLEANVIEAAEQCGILSIPRVAAPVKLRDLLDSWPQDRRIIYCDEGDAGQNPLPVLANVKERKLALLIGPEGGFSEEERQWLRSLDFVTAIPLGPRILRADTAAVAAMAVVQAAIGDWR*