ggKbase home page

SCNpilot_cont_300_bf_scaffold_3049_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 6061..6891

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhizobium sp. CF080 RepID=J2KNR7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 259.0
  • Bit_score: 282
  • Evalue 4.60e-73
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EUB99390.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rh similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 259.0
  • Bit_score: 282
  • Evalue 6.50e-73
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 256.0
  • Bit_score: 190
  • Evalue 8.80e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGAATTCCTCTTCACGCGCGAAGGATGGCAGGCGCTTTCAGGTCAAGGATTTCCTGCGCGCCGATGGCGTCACCGTCGACAGCCCGGACGACCGGCTGACGATGGAAGACACGCTGCTGGCCGGCGATTTCTATCACAAGGAGCTGCGCGACGGGCTGTTCCTGCATCTGAGCGATGTGCGCGAGGAGCGCGCCTTCACCGCCGTCTCGACGCTGAAGGAGGAGTTGTCCTGCATCTTCTTCCTCGACGGCGACGTGGAGGTGGCGATCGGCGACCGGACTTTCGCGTTCCACGGCAGCCGGCAGCGGATCATCGAGGGCGCGGCGATCATGAATTCGGCGCCGGAAACCTTCCGGCGCTCGTCCGGCGGCGACCAGCATTTGCGCCATCTGGTGGTGTCCGCCAGTCCGGAATGGCTGAATCTCGACGGCCTGACGCATCTGCGCGACGAGCGCCGGGCCTCGACCCTGCTGAAGGACCATCTCGCCGATCATCGATGGTCACTGACGCCGCGGCTCGCCGATCTCGTGCGGCAATTGTTTGCGCCGACTCCGCTGATGCCGGAACTGCGCGATCTTTATCTCGAATGCCGGGCGGTGGAGATCGTCGTCGAAACCATTTCGGCCGTCATGCGGGCCGAGCGCCGCACCGATGGCCCGCAGCTTCTCGCCCGCCACGATGCCGCCCGTCTGCAGCGGGCCAAGGATATCATCGCCGTCAACCTGATGCAGCCGCTCAGCGTCGACATGGTCGCTCGCGAGGCCGGCATCAGCGCCAGCGGGCTGCAACGCCTGGCTGGAACGCGCCTTCGAGGCGCTGAAAGCCCATGA
PROTEIN sequence
Length: 277
MNSSSRAKDGRRFQVKDFLRADGVTVDSPDDRLTMEDTLLAGDFYHKELRDGLFLHLSDVREERAFTAVSTLKEELSCIFFLDGDVEVAIGDRTFAFHGSRQRIIEGAAIMNSAPETFRRSSGGDQHLRHLVVSASPEWLNLDGLTHLRDERRASTLLKDHLADHRWSLTPRLADLVRQLFAPTPLMPELRDLYLECRAVEIVVETISAVMRAERRTDGPQLLARHDAARLQRAKDIIAVNLMQPLSVDMVAREAGISASGLQRLAGTRLRGAESP*